Protein–RNA interactions for Protein: P07903

Ercc1, DNA excision repair protein ERCC-1, mousemouse

Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1P07903 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ercc1P07903 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ercc1P07903 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ercc1P07903 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Ercc1P07903 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Ercc1P07903 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC15.75■□□□□ 0.11
Ercc1P07903 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Ercc1P07903 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ercc1P07903 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Ercc1P07903 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ercc1P07903 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ercc1P07903 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ercc1P07903 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ercc1P07903 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ercc1P07903 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ercc1P07903 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ercc1P07903 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ercc1P07903 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ercc1P07903 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ercc1P07903 Gm9885-202ENSMUST00000186234 2209 ntBASIC15.74■□□□□ 0.11
Ercc1P07903 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ercc1P07903 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ercc1P07903 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Ercc1P07903 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ercc1P07903 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Ercc1P07903 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Ercc1P07903 AC093043.1-201ENSMUST00000226700 898 ntBASIC15.74■□□□□ 0.11
Ercc1P07903 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ercc1P07903 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Ercc1P07903 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ercc1P07903 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC15.74■□□□□ 0.11
Ercc1P07903 Grk6-206ENSMUST00000224995 2971 ntBASIC15.74■□□□□ 0.11
Ercc1P07903 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ercc1P07903 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ercc1P07903 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ercc1P07903 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ercc1P07903 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ercc1P07903 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ercc1P07903 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ercc1P07903 Gm9870-201ENSMUST00000063874 645 ntBASIC15.73■□□□□ 0.11
Ercc1P07903 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC15.73■□□□□ 0.11
Ercc1P07903 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ercc1P07903 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Ercc1P07903 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ercc1P07903 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC15.72■□□□□ 0.11
Ercc1P07903 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ercc1P07903 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ercc1P07903 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ercc1P07903 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ercc1P07903 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
Ercc1P07903 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC15.72■□□□□ 0.11
Ercc1P07903 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ercc1P07903 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Ercc1P07903 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC15.72■□□□□ 0.11
Ercc1P07903 Gm10657-201ENSMUST00000193528 1031 ntBASIC15.72■□□□□ 0.11
Ercc1P07903 AC154266.1-201ENSMUST00000223190 503 ntBASIC15.72■□□□□ 0.11
Ercc1P07903 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ercc1P07903 Fam105a-203ENSMUST00000226170 3043 ntBASIC15.72■□□□□ 0.11
Ercc1P07903 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ercc1P07903 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC15.72■□□□□ 0.11
Ercc1P07903 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ercc1P07903 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ercc1P07903 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ercc1P07903 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ercc1P07903 Gm45141-201ENSMUST00000206502 1888 ntBASIC15.71■□□□□ 0.11
Ercc1P07903 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ercc1P07903 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ercc1P07903 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Ercc1P07903 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Ercc1P07903 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ercc1P07903 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ercc1P07903 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC15.71■□□□□ 0.11
Ercc1P07903 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC15.71■□□□□ 0.11
Ercc1P07903 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ercc1P07903 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ercc1P07903 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ercc1P07903 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ercc1P07903 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Ercc1P07903 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ercc1P07903 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ercc1P07903 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ercc1P07903 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ercc1P07903 Gm42900-201ENSMUST00000197184 2167 ntBASIC15.7■□□□□ 0.1
Ercc1P07903 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ercc1P07903 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ercc1P07903 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Ercc1P07903 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ercc1P07903 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ercc1P07903 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ercc1P07903 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ercc1P07903 Gm38342-201ENSMUST00000195710 2980 ntBASIC15.69■□□□□ 0.1
Ercc1P07903 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Ercc1P07903 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Ercc1P07903 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Ercc1P07903 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC15.69■□□□□ 0.1
Ercc1P07903 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC15.69■□□□□ 0.1
Ercc1P07903 Gm9959-201ENSMUST00000068277 390 ntBASIC15.69■□□□□ 0.1
Ercc1P07903 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ercc1P07903 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ercc1P07903 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC15.69■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms