Protein–RNA interactions for Protein: P04756

Chrna1, Acetylcholine receptor subunit alpha, mousemouse

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna1P04756 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Chrna1P04756 Gm20760-201ENSMUST00000179197 648 ntBASIC20.33■□□□□ 0.85
Chrna1P04756 Gm37856-201ENSMUST00000191634 999 ntBASIC20.33■□□□□ 0.85
Chrna1P04756 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Chrna1P04756 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC20.33■□□□□ 0.84
Chrna1P04756 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
Chrna1P04756 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Chrna1P04756 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Chrna1P04756 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Chrna1P04756 Gm43672-201ENSMUST00000199072 1731 ntBASIC20.33■□□□□ 0.84
Chrna1P04756 Golph3-202ENSMUST00000226517 2359 ntBASIC20.32■□□□□ 0.84
Chrna1P04756 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Chrna1P04756 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Chrna1P04756 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
Chrna1P04756 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Chrna1P04756 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
Chrna1P04756 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Chrna1P04756 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Chrna1P04756 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Chrna1P04756 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Chrna1P04756 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Chrna1P04756 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Chrna1P04756 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Chrna1P04756 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Chrna1P04756 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Chrna1P04756 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Chrna1P04756 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Chrna1P04756 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Chrna1P04756 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Chrna1P04756 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Chrna1P04756 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Chrna1P04756 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Chrna1P04756 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Chrna1P04756 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Chrna1P04756 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Chrna1P04756 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC20.3■□□□□ 0.84
Chrna1P04756 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC20.3■□□□□ 0.84
Chrna1P04756 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Chrna1P04756 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Chrna1P04756 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Chrna1P04756 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Chrna1P04756 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Chrna1P04756 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
Chrna1P04756 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Chrna1P04756 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Chrna1P04756 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Chrna1P04756 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
Chrna1P04756 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Chrna1P04756 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Chrna1P04756 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Chrna1P04756 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
Chrna1P04756 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC20.29■□□□□ 0.84
Chrna1P04756 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Chrna1P04756 AC126028.2-201ENSMUST00000228100 1833 ntBASIC20.29■□□□□ 0.84
Chrna1P04756 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC20.29■□□□□ 0.84
Chrna1P04756 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC20.29■□□□□ 0.84
Chrna1P04756 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Chrna1P04756 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Chrna1P04756 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Chrna1P04756 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Chrna1P04756 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Chrna1P04756 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Chrna1P04756 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC20.28■□□□□ 0.84
Chrna1P04756 AC135637.1-201ENSMUST00000227750 365 ntBASIC20.28■□□□□ 0.84
Chrna1P04756 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Chrna1P04756 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Chrna1P04756 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Chrna1P04756 Notumos-201ENSMUST00000151998 2659 ntBASIC20.28■□□□□ 0.84
Chrna1P04756 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Chrna1P04756 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Chrna1P04756 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC20.27■□□□□ 0.84
Chrna1P04756 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Chrna1P04756 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Chrna1P04756 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC20.27■□□□□ 0.84
Chrna1P04756 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Chrna1P04756 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Chrna1P04756 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Chrna1P04756 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Chrna1P04756 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Chrna1P04756 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Chrna1P04756 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Chrna1P04756 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Chrna1P04756 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Chrna1P04756 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Chrna1P04756 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Chrna1P04756 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC20.26■□□□□ 0.83
Chrna1P04756 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Chrna1P04756 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC20.26■□□□□ 0.83
Chrna1P04756 AC124603.1-201ENSMUST00000223843 308 ntBASIC20.26■□□□□ 0.83
Chrna1P04756 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Chrna1P04756 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Chrna1P04756 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Chrna1P04756 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Chrna1P04756 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Chrna1P04756 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Chrna1P04756 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Chrna1P04756 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Chrna1P04756 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Chrna1P04756 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Chrna1P04756 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC20.25■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms