Protein–RNA interactions for Protein: O88597

Becn1, Beclin-1, mousemouse

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Becn1O88597 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC21.49■■□□□ 1.03
Becn1O88597 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Becn1O88597 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Becn1O88597 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Becn1O88597 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
Becn1O88597 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Becn1O88597 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC21.49■■□□□ 1.03
Becn1O88597 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Becn1O88597 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC21.49■■□□□ 1.03
Becn1O88597 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Becn1O88597 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Becn1O88597 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Becn1O88597 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC21.49■■□□□ 1.03
Becn1O88597 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Becn1O88597 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Becn1O88597 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
Becn1O88597 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Becn1O88597 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Becn1O88597 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC21.48■■□□□ 1.03
Becn1O88597 Gm42922-201ENSMUST00000195887 2078 ntBASIC21.48■■□□□ 1.03
Becn1O88597 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Becn1O88597 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Becn1O88597 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Becn1O88597 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC21.48■■□□□ 1.03
Becn1O88597 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Becn1O88597 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC21.48■■□□□ 1.03
Becn1O88597 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Becn1O88597 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Becn1O88597 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC21.48■■□□□ 1.03
Becn1O88597 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Becn1O88597 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Becn1O88597 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Becn1O88597 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Becn1O88597 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Becn1O88597 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Becn1O88597 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC21.48■■□□□ 1.03
Becn1O88597 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC21.48■■□□□ 1.03
Becn1O88597 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC21.47■■□□□ 1.03
Becn1O88597 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Becn1O88597 Gm22238-201ENSMUST00000175222 88 ntBASIC21.47■■□□□ 1.03
Becn1O88597 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
Becn1O88597 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC21.47■■□□□ 1.03
Becn1O88597 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Becn1O88597 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Becn1O88597 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Becn1O88597 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Becn1O88597 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Becn1O88597 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Becn1O88597 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Becn1O88597 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Becn1O88597 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Becn1O88597 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Becn1O88597 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
Becn1O88597 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Becn1O88597 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC21.46■■□□□ 1.03
Becn1O88597 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
Becn1O88597 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
Becn1O88597 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC21.46■■□□□ 1.03
Becn1O88597 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Becn1O88597 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Becn1O88597 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Becn1O88597 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.02
Becn1O88597 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC21.45■■□□□ 1.02
Becn1O88597 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Becn1O88597 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Becn1O88597 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Becn1O88597 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
Becn1O88597 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Becn1O88597 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC21.44■■□□□ 1.02
Becn1O88597 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Becn1O88597 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Becn1O88597 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC21.44■■□□□ 1.02
Becn1O88597 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC21.44■■□□□ 1.02
Becn1O88597 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Becn1O88597 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Becn1O88597 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Becn1O88597 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Becn1O88597 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Becn1O88597 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC21.44■■□□□ 1.02
Becn1O88597 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Becn1O88597 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Becn1O88597 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Becn1O88597 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Becn1O88597 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Becn1O88597 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Becn1O88597 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
Becn1O88597 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC21.43■■□□□ 1.02
Becn1O88597 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Becn1O88597 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Becn1O88597 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Becn1O88597 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Becn1O88597 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Becn1O88597 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Becn1O88597 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Becn1O88597 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Becn1O88597 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
Becn1O88597 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Becn1O88597 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Becn1O88597 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Becn1O88597 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms