Protein–RNA interactions for Protein: O88472

Tnfrsf17, Tumor necrosis factor receptor superfamily member 17, mousemouse

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf17O88472 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tnfrsf17O88472 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Tnfrsf17O88472 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tnfrsf17O88472 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Tnfrsf17O88472 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tnfrsf17O88472 Gm6802-201ENSMUST00000167843 1983 ntBASIC17.55■□□□□ 0.4
Tnfrsf17O88472 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tnfrsf17O88472 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Tnfrsf17O88472 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tnfrsf17O88472 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Tnfrsf17O88472 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC17.54■□□□□ 0.4
Tnfrsf17O88472 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tnfrsf17O88472 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tnfrsf17O88472 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tnfrsf17O88472 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Tnfrsf17O88472 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Tnfrsf17O88472 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tnfrsf17O88472 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Tnfrsf17O88472 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tnfrsf17O88472 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tnfrsf17O88472 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC17.53■□□□□ 0.4
Tnfrsf17O88472 Gm11539-201ENSMUST00000119837 557 ntBASIC17.53■□□□□ 0.4
Tnfrsf17O88472 Gm13436-201ENSMUST00000120418 567 ntBASIC17.53■□□□□ 0.4
Tnfrsf17O88472 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC17.53■□□□□ 0.4
Tnfrsf17O88472 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tnfrsf17O88472 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Tnfrsf17O88472 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Tnfrsf17O88472 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Tnfrsf17O88472 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.4
Tnfrsf17O88472 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Tnfrsf17O88472 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Tnfrsf17O88472 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Tnfrsf17O88472 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Tnfrsf17O88472 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
Tnfrsf17O88472 Arhgef4-208ENSMUST00000211073 171 ntBASIC17.52■□□□□ 0.4
Tnfrsf17O88472 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC17.52■□□□□ 0.4
Tnfrsf17O88472 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Tnfrsf17O88472 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Tnfrsf17O88472 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Tnfrsf17O88472 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Tnfrsf17O88472 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tnfrsf17O88472 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC17.51■□□□□ 0.39
Tnfrsf17O88472 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC17.51■□□□□ 0.39
Tnfrsf17O88472 Gm7889-201ENSMUST00000185591 958 ntBASIC17.51■□□□□ 0.39
Tnfrsf17O88472 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC17.51■□□□□ 0.39
Tnfrsf17O88472 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC17.51■□□□□ 0.39
Tnfrsf17O88472 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC17.51■□□□□ 0.39
Tnfrsf17O88472 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Tnfrsf17O88472 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Tnfrsf17O88472 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tnfrsf17O88472 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tnfrsf17O88472 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Tnfrsf17O88472 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tnfrsf17O88472 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC17.5■□□□□ 0.39
Tnfrsf17O88472 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Tnfrsf17O88472 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Tnfrsf17O88472 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tnfrsf17O88472 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Tnfrsf17O88472 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tnfrsf17O88472 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC17.5■□□□□ 0.39
Tnfrsf17O88472 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tnfrsf17O88472 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tnfrsf17O88472 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tnfrsf17O88472 Gm14464-201ENSMUST00000119658 1254 ntBASIC17.49■□□□□ 0.39
Tnfrsf17O88472 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tnfrsf17O88472 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Tnfrsf17O88472 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tnfrsf17O88472 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Tnfrsf17O88472 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Tnfrsf17O88472 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tnfrsf17O88472 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Tnfrsf17O88472 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Tnfrsf17O88472 Dmtn-209ENSMUST00000228295 2572 ntBASIC17.48■□□□□ 0.39
Tnfrsf17O88472 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tnfrsf17O88472 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tnfrsf17O88472 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Tnfrsf17O88472 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tnfrsf17O88472 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Tnfrsf17O88472 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Tnfrsf17O88472 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Tnfrsf17O88472 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tnfrsf17O88472 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
Tnfrsf17O88472 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tnfrsf17O88472 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tnfrsf17O88472 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Tnfrsf17O88472 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tnfrsf17O88472 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tnfrsf17O88472 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tnfrsf17O88472 Gm38160-201ENSMUST00000193090 2499 ntBASIC17.47■□□□□ 0.39
Tnfrsf17O88472 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Tnfrsf17O88472 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tnfrsf17O88472 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tnfrsf17O88472 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tnfrsf17O88472 Gm23634-201ENSMUST00000175071 91 ntBASIC17.47■□□□□ 0.39
Tnfrsf17O88472 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tnfrsf17O88472 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Tnfrsf17O88472 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tnfrsf17O88472 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Tnfrsf17O88472 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tnfrsf17O88472 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms