Protein–RNA interactions for Protein: O55142

Rpl35a, 60S ribosomal protein L35a, mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl35aO55142 Gm7291-201ENSMUST00000199147 382 ntBASIC14.01□□□□□ -0.17
Rpl35aO55142 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC14.01□□□□□ -0.17
Rpl35aO55142 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC14.01□□□□□ -0.17
Rpl35aO55142 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rpl35aO55142 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rpl35aO55142 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC14□□□□□ -0.17
Rpl35aO55142 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Rpl35aO55142 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC14□□□□□ -0.17
Rpl35aO55142 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
Rpl35aO55142 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC14□□□□□ -0.17
Rpl35aO55142 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC14□□□□□ -0.17
Rpl35aO55142 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
Rpl35aO55142 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Rpl35aO55142 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC14□□□□□ -0.17
Rpl35aO55142 Gm10849-201ENSMUST00000100397 618 ntBASIC14□□□□□ -0.17
Rpl35aO55142 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Rpl35aO55142 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC14□□□□□ -0.17
Rpl35aO55142 Gm27405-201ENSMUST00000184201 112 ntBASIC14□□□□□ -0.17
Rpl35aO55142 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC14□□□□□ -0.17
Rpl35aO55142 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC14□□□□□ -0.17
Rpl35aO55142 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC14□□□□□ -0.17
Rpl35aO55142 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rpl35aO55142 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rpl35aO55142 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rpl35aO55142 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rpl35aO55142 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC14□□□□□ -0.17
Rpl35aO55142 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC14□□□□□ -0.17
Rpl35aO55142 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Rpl35aO55142 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Rpl35aO55142 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rpl35aO55142 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Rpl35aO55142 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rpl35aO55142 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rpl35aO55142 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
Rpl35aO55142 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC13.99□□□□□ -0.17
Rpl35aO55142 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Rpl35aO55142 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Rpl35aO55142 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rpl35aO55142 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rpl35aO55142 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Rpl35aO55142 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Rpl35aO55142 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Rpl35aO55142 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rpl35aO55142 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rpl35aO55142 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Rpl35aO55142 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rpl35aO55142 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rpl35aO55142 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rpl35aO55142 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rpl35aO55142 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rpl35aO55142 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Rpl35aO55142 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Rpl35aO55142 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rpl35aO55142 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rpl35aO55142 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rpl35aO55142 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rpl35aO55142 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Rpl35aO55142 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Rpl35aO55142 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Rpl35aO55142 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Rpl35aO55142 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rpl35aO55142 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rpl35aO55142 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rpl35aO55142 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
Rpl35aO55142 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rpl35aO55142 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rpl35aO55142 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rpl35aO55142 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Rpl35aO55142 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC13.97□□□□□ -0.17
Rpl35aO55142 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Rpl35aO55142 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rpl35aO55142 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rpl35aO55142 Gm7860-201ENSMUST00000121190 879 ntBASIC13.97□□□□□ -0.17
Rpl35aO55142 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Rpl35aO55142 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC13.97□□□□□ -0.17
Rpl35aO55142 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC13.97□□□□□ -0.17
Rpl35aO55142 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC13.97□□□□□ -0.17
Rpl35aO55142 Gm7514-201ENSMUST00000209475 934 ntBASIC13.97□□□□□ -0.17
Rpl35aO55142 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rpl35aO55142 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rpl35aO55142 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rpl35aO55142 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Rpl35aO55142 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rpl35aO55142 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rpl35aO55142 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rpl35aO55142 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Rpl35aO55142 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC13.96□□□□□ -0.17
Rpl35aO55142 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rpl35aO55142 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rpl35aO55142 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Rpl35aO55142 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rpl35aO55142 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rpl35aO55142 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
Rpl35aO55142 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC13.96□□□□□ -0.17
Rpl35aO55142 Ap3s1-204ENSMUST00000225520 957 ntBASIC13.96□□□□□ -0.17
Rpl35aO55142 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC13.96□□□□□ -0.17
Rpl35aO55142 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rpl35aO55142 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rpl35aO55142 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rpl35aO55142 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms