Protein–RNA interactions for Protein: O54990

Prom1, Prominin-1, mousemouse

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prom1O54990 Gm44549-201ENSMUST00000208351 577 ntBASIC20.85■□□□□ 0.93
Prom1O54990 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC20.85■□□□□ 0.93
Prom1O54990 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Prom1O54990 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Prom1O54990 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Prom1O54990 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC20.85■□□□□ 0.93
Prom1O54990 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Prom1O54990 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Prom1O54990 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Prom1O54990 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Prom1O54990 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Prom1O54990 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.84■□□□□ 0.93
Prom1O54990 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Prom1O54990 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Prom1O54990 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC20.84■□□□□ 0.93
Prom1O54990 Gm19094-201ENSMUST00000209791 1246 ntBASIC20.84■□□□□ 0.93
Prom1O54990 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC20.84■□□□□ 0.93
Prom1O54990 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Prom1O54990 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Prom1O54990 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC20.84■□□□□ 0.93
Prom1O54990 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Prom1O54990 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Prom1O54990 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Prom1O54990 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Prom1O54990 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Prom1O54990 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Prom1O54990 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Prom1O54990 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Prom1O54990 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Prom1O54990 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Prom1O54990 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Prom1O54990 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC20.83■□□□□ 0.93
Prom1O54990 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Prom1O54990 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC20.83■□□□□ 0.93
Prom1O54990 Gm10698-201ENSMUST00000182663 604 ntBASIC20.83■□□□□ 0.93
Prom1O54990 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Prom1O54990 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Prom1O54990 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Prom1O54990 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Prom1O54990 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Prom1O54990 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Prom1O54990 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Prom1O54990 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Prom1O54990 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Prom1O54990 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Prom1O54990 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Prom1O54990 AL672049.1-201ENSMUST00000197943 91 ntBASIC20.82■□□□□ 0.92
Prom1O54990 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC20.82■□□□□ 0.92
Prom1O54990 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC20.82■□□□□ 0.92
Prom1O54990 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Prom1O54990 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Prom1O54990 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Prom1O54990 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC20.82■□□□□ 0.92
Prom1O54990 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.82■□□□□ 0.92
Prom1O54990 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.82■□□□□ 0.92
Prom1O54990 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Prom1O54990 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Prom1O54990 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Prom1O54990 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Prom1O54990 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
Prom1O54990 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Prom1O54990 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Prom1O54990 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Prom1O54990 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
Prom1O54990 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Prom1O54990 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Prom1O54990 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC20.81■□□□□ 0.92
Prom1O54990 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Prom1O54990 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Prom1O54990 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Prom1O54990 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Prom1O54990 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Prom1O54990 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC20.8■□□□□ 0.92
Prom1O54990 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Prom1O54990 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Prom1O54990 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC20.8■□□□□ 0.92
Prom1O54990 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Prom1O54990 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.8■□□□□ 0.92
Prom1O54990 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Prom1O54990 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Prom1O54990 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Prom1O54990 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Prom1O54990 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Prom1O54990 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Prom1O54990 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Prom1O54990 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Prom1O54990 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Prom1O54990 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Prom1O54990 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Prom1O54990 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Prom1O54990 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Prom1O54990 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Prom1O54990 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Prom1O54990 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Prom1O54990 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Prom1O54990 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Prom1O54990 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Prom1O54990 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Prom1O54990 Gm5540-201ENSMUST00000131852 1848 ntBASIC20.77■□□□□ 0.92
Prom1O54990 AC135963.1-201ENSMUST00000211640 717 ntBASIC20.77■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms