Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Npc1O35604 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.31■□□□□ 0.52
Npc1O35604 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Npc1O35604 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Npc1O35604 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Npc1O35604 Gm13534-201ENSMUST00000121169 513 ntBASIC18.31■□□□□ 0.52
Npc1O35604 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Npc1O35604 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Npc1O35604 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Npc1O35604 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Npc1O35604 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Npc1O35604 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Npc1O35604 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Npc1O35604 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Npc1O35604 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Npc1O35604 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Npc1O35604 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Npc1O35604 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Npc1O35604 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Npc1O35604 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Npc1O35604 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC18.3■□□□□ 0.52
Npc1O35604 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC18.3■□□□□ 0.52
Npc1O35604 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC18.3■□□□□ 0.52
Npc1O35604 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Npc1O35604 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
Npc1O35604 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Npc1O35604 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Npc1O35604 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Npc1O35604 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC18.29■□□□□ 0.52
Npc1O35604 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Npc1O35604 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Npc1O35604 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Npc1O35604 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Npc1O35604 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Npc1O35604 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Npc1O35604 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Npc1O35604 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Npc1O35604 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Npc1O35604 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Npc1O35604 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Npc1O35604 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Npc1O35604 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC18.28■□□□□ 0.52
Npc1O35604 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC18.28■□□□□ 0.52
Npc1O35604 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Npc1O35604 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Npc1O35604 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Npc1O35604 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Npc1O35604 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Npc1O35604 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Npc1O35604 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Npc1O35604 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Npc1O35604 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.52
Npc1O35604 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Npc1O35604 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Npc1O35604 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Npc1O35604 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Npc1O35604 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Npc1O35604 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Npc1O35604 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.27■□□□□ 0.52
Npc1O35604 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Npc1O35604 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Npc1O35604 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
Npc1O35604 Gm10655-201ENSMUST00000098658 1397 ntBASIC18.27■□□□□ 0.51
Npc1O35604 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Npc1O35604 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Npc1O35604 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Npc1O35604 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Npc1O35604 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Npc1O35604 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Npc1O35604 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Npc1O35604 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Npc1O35604 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Npc1O35604 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Npc1O35604 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Npc1O35604 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
Npc1O35604 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Npc1O35604 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Npc1O35604 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Npc1O35604 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Npc1O35604 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
Npc1O35604 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC18.25■□□□□ 0.51
Npc1O35604 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Npc1O35604 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Npc1O35604 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
Npc1O35604 AC126028.2-201ENSMUST00000228100 1833 ntBASIC18.25■□□□□ 0.51
Npc1O35604 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Npc1O35604 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Npc1O35604 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Npc1O35604 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Npc1O35604 Gm7290-201ENSMUST00000104990 617 ntBASIC18.24■□□□□ 0.51
Npc1O35604 Gm12918-201ENSMUST00000120234 636 ntBASIC18.24■□□□□ 0.51
Npc1O35604 Gm15710-201ENSMUST00000121821 636 ntBASIC18.24■□□□□ 0.51
Npc1O35604 Gm5075-201ENSMUST00000196916 622 ntBASIC18.24■□□□□ 0.51
Npc1O35604 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Npc1O35604 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Npc1O35604 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
Npc1O35604 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.24■□□□□ 0.51
Npc1O35604 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC18.24■□□□□ 0.51
Npc1O35604 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Npc1O35604 Gm10602-201ENSMUST00000098239 609 ntBASIC18.24■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms