Protein–RNA interactions for Protein: O09111

Ndufb11, NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 11, mitochondrial, mousemouse

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufb11O09111 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ndufb11O09111 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ndufb11O09111 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC15.14■□□□□ 0.01
Ndufb11O09111 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ndufb11O09111 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ndufb11O09111 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ndufb11O09111 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ndufb11O09111 Shroom3-211ENSMUST00000225438 5742 ntBASIC15.14■□□□□ 0.01
Ndufb11O09111 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ndufb11O09111 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ndufb11O09111 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ndufb11O09111 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ndufb11O09111 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ndufb11O09111 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ndufb11O09111 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Ndufb11O09111 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ndufb11O09111 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ndufb11O09111 Gm43213-201ENSMUST00000151866 1790 ntBASIC15.13■□□□□ 0.01
Ndufb11O09111 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ndufb11O09111 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC15.13■□□□□ 0.01
Ndufb11O09111 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ndufb11O09111 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ndufb11O09111 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ndufb11O09111 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ndufb11O09111 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Ndufb11O09111 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ndufb11O09111 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ndufb11O09111 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ndufb11O09111 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC15.13■□□□□ 0.01
Ndufb11O09111 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ndufb11O09111 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ndufb11O09111 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ndufb11O09111 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Ndufb11O09111 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ndufb11O09111 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Ndufb11O09111 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ndufb11O09111 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ndufb11O09111 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ndufb11O09111 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ndufb11O09111 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ndufb11O09111 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ndufb11O09111 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ndufb11O09111 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Ndufb11O09111 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ndufb11O09111 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ndufb11O09111 Zcchc6-207ENSMUST00000225576 2499 ntBASIC15.11■□□□□ 0.01
Ndufb11O09111 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ndufb11O09111 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ndufb11O09111 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ndufb11O09111 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ndufb11O09111 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ndufb11O09111 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ndufb11O09111 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Ndufb11O09111 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ndufb11O09111 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Ndufb11O09111 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ndufb11O09111 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Ndufb11O09111 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ndufb11O09111 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ndufb11O09111 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
Ndufb11O09111 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ndufb11O09111 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ndufb11O09111 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ndufb11O09111 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ndufb11O09111 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ndufb11O09111 Gm7856-201ENSMUST00000117514 1493 ntBASIC15.1■□□□□ 0.01
Ndufb11O09111 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ndufb11O09111 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ndufb11O09111 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ndufb11O09111 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ndufb11O09111 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC15.1■□□□□ 0.01
Ndufb11O09111 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ndufb11O09111 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ndufb11O09111 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Ndufb11O09111 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Ndufb11O09111 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ndufb11O09111 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ndufb11O09111 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ndufb11O09111 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Ndufb11O09111 Gm5421-201ENSMUST00000181698 2354 ntBASIC15.1■□□□□ 0.01
Ndufb11O09111 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Ndufb11O09111 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ndufb11O09111 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ndufb11O09111 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ndufb11O09111 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ndufb11O09111 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ndufb11O09111 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ndufb11O09111 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ndufb11O09111 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ndufb11O09111 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ndufb11O09111 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ndufb11O09111 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ndufb11O09111 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ndufb11O09111 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ndufb11O09111 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ndufb11O09111 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ndufb11O09111 Gm43294-201ENSMUST00000202850 2490 ntBASIC15.09■□□□□ 0.01
Ndufb11O09111 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Ndufb11O09111 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ndufb11O09111 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms