Protein–RNA interactions for Protein: O08811

Ercc2, General transcription and DNA repair factor IIH helicase subunit XPD, mousemouse

Known RBP Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc2O08811 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Ercc2O08811 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Ercc2O08811 Rncr4-201ENSMUST00000194541 2234 ntBASIC19.27■□□□□ 0.67
Ercc2O08811 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Ercc2O08811 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
Ercc2O08811 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ercc2O08811 Golph3-205ENSMUST00000228671 2842 ntBASIC19.26■□□□□ 0.67
Ercc2O08811 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.26■□□□□ 0.67
Ercc2O08811 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ercc2O08811 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ercc2O08811 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Ercc2O08811 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ercc2O08811 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ercc2O08811 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC19.26■□□□□ 0.67
Ercc2O08811 Gm13534-201ENSMUST00000121169 513 ntBASIC19.26■□□□□ 0.67
Ercc2O08811 Gm8495-201ENSMUST00000188740 694 ntBASIC19.26■□□□□ 0.67
Ercc2O08811 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ercc2O08811 Gm18671-201ENSMUST00000214826 683 ntBASIC19.26■□□□□ 0.67
Ercc2O08811 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ercc2O08811 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ercc2O08811 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ercc2O08811 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC19.25■□□□□ 0.67
Ercc2O08811 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ercc2O08811 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC19.25■□□□□ 0.67
Ercc2O08811 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ercc2O08811 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ercc2O08811 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ercc2O08811 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ercc2O08811 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ercc2O08811 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ercc2O08811 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
Ercc2O08811 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ercc2O08811 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC19.25■□□□□ 0.67
Ercc2O08811 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.25■□□□□ 0.67
Ercc2O08811 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ercc2O08811 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC19.25■□□□□ 0.67
Ercc2O08811 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ercc2O08811 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ercc2O08811 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ercc2O08811 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ercc2O08811 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ercc2O08811 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ercc2O08811 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ercc2O08811 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ercc2O08811 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC19.24■□□□□ 0.67
Ercc2O08811 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ercc2O08811 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ercc2O08811 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ercc2O08811 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ercc2O08811 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Ercc2O08811 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ercc2O08811 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ercc2O08811 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ercc2O08811 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ercc2O08811 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
Ercc2O08811 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Ercc2O08811 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ercc2O08811 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ercc2O08811 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC19.23■□□□□ 0.67
Ercc2O08811 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ercc2O08811 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ercc2O08811 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ercc2O08811 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ercc2O08811 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Ercc2O08811 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ercc2O08811 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ercc2O08811 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ercc2O08811 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ercc2O08811 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Ercc2O08811 Gm26571-201ENSMUST00000181399 666 ntBASIC19.22■□□□□ 0.67
Ercc2O08811 Gm26971-201ENSMUST00000182423 1072 ntBASIC19.22■□□□□ 0.67
Ercc2O08811 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ercc2O08811 Ap3s1-204ENSMUST00000225520 957 ntBASIC19.22■□□□□ 0.67
Ercc2O08811 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ercc2O08811 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Ercc2O08811 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ercc2O08811 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC19.22■□□□□ 0.67
Ercc2O08811 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ercc2O08811 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Ercc2O08811 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ercc2O08811 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ercc2O08811 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ercc2O08811 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
Ercc2O08811 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Ercc2O08811 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Ercc2O08811 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ercc2O08811 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Ercc2O08811 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC19.21■□□□□ 0.67
Ercc2O08811 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ercc2O08811 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Ercc2O08811 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ercc2O08811 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ercc2O08811 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ercc2O08811 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.21■□□□□ 0.67
Ercc2O08811 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ercc2O08811 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ercc2O08811 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ercc2O08811 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Ercc2O08811 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Ercc2O08811 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms