Protein–RNA interactions for Protein: C0HKE2

Hist1h2ac, Histone H2A type 1-C, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h2acC0HKE2 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hist1h2acC0HKE2 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
Hist1h2acC0HKE2 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hist1h2acC0HKE2 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Hist1h2acC0HKE2 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hist1h2acC0HKE2 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hist1h2acC0HKE2 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hist1h2acC0HKE2 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hist1h2acC0HKE2 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hist1h2acC0HKE2 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Hist1h2acC0HKE2 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hist1h2acC0HKE2 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hist1h2acC0HKE2 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hist1h2acC0HKE2 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hist1h2acC0HKE2 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hist1h2acC0HKE2 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Hist1h2acC0HKE2 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Hist1h2acC0HKE2 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Hist1h2acC0HKE2 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hist1h2acC0HKE2 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Hist1h2acC0HKE2 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hist1h2acC0HKE2 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hist1h2acC0HKE2 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hist1h2acC0HKE2 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hist1h2acC0HKE2 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hist1h2acC0HKE2 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hist1h2acC0HKE2 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hist1h2acC0HKE2 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC17.18■□□□□ 0.34
Hist1h2acC0HKE2 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC17.18■□□□□ 0.34
Hist1h2acC0HKE2 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hist1h2acC0HKE2 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hist1h2acC0HKE2 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hist1h2acC0HKE2 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hist1h2acC0HKE2 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hist1h2acC0HKE2 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hist1h2acC0HKE2 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hist1h2acC0HKE2 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hist1h2acC0HKE2 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Hist1h2acC0HKE2 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hist1h2acC0HKE2 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hist1h2acC0HKE2 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Hist1h2acC0HKE2 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC17.17■□□□□ 0.34
Hist1h2acC0HKE2 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hist1h2acC0HKE2 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hist1h2acC0HKE2 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Hist1h2acC0HKE2 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Hist1h2acC0HKE2 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hist1h2acC0HKE2 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hist1h2acC0HKE2 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hist1h2acC0HKE2 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Hist1h2acC0HKE2 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC17.16■□□□□ 0.34
Hist1h2acC0HKE2 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hist1h2acC0HKE2 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC17.16■□□□□ 0.34
Hist1h2acC0HKE2 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Hist1h2acC0HKE2 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hist1h2acC0HKE2 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Hist1h2acC0HKE2 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hist1h2acC0HKE2 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Hist1h2acC0HKE2 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hist1h2acC0HKE2 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hist1h2acC0HKE2 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hist1h2acC0HKE2 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hist1h2acC0HKE2 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Hist1h2acC0HKE2 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hist1h2acC0HKE2 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hist1h2acC0HKE2 Gm43173-201ENSMUST00000202246 593 ntBASIC17.15■□□□□ 0.34
Hist1h2acC0HKE2 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC17.15■□□□□ 0.34
Hist1h2acC0HKE2 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hist1h2acC0HKE2 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hist1h2acC0HKE2 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hist1h2acC0HKE2 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hist1h2acC0HKE2 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Hist1h2acC0HKE2 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hist1h2acC0HKE2 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
Hist1h2acC0HKE2 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Hist1h2acC0HKE2 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Hist1h2acC0HKE2 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hist1h2acC0HKE2 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Hist1h2acC0HKE2 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hist1h2acC0HKE2 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Hist1h2acC0HKE2 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC17.14■□□□□ 0.33
Hist1h2acC0HKE2 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC17.14■□□□□ 0.33
Hist1h2acC0HKE2 Gm45417-201ENSMUST00000209533 758 ntBASIC17.14■□□□□ 0.33
Hist1h2acC0HKE2 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hist1h2acC0HKE2 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Hist1h2acC0HKE2 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Hist1h2acC0HKE2 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Hist1h2acC0HKE2 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hist1h2acC0HKE2 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Hist1h2acC0HKE2 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hist1h2acC0HKE2 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hist1h2acC0HKE2 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hist1h2acC0HKE2 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hist1h2acC0HKE2 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hist1h2acC0HKE2 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC17.13■□□□□ 0.33
Hist1h2acC0HKE2 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hist1h2acC0HKE2 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hist1h2acC0HKE2 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC17.13■□□□□ 0.33
Hist1h2acC0HKE2 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hist1h2acC0HKE2 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms