Protein–RNA interactions for Protein: B9EKX1

Ptchd4, Patched domain-containing protein 4, mousemouse

Predictions only

Length 904 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd4B9EKX1 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ptchd4B9EKX1 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ptchd4B9EKX1 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ptchd4B9EKX1 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
Ptchd4B9EKX1 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ptchd4B9EKX1 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.31■□□□□ 0.84
Ptchd4B9EKX1 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ptchd4B9EKX1 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
Ptchd4B9EKX1 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Ptchd4B9EKX1 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC20.31■□□□□ 0.84
Ptchd4B9EKX1 Gm2559-201ENSMUST00000201323 363 ntBASIC20.31■□□□□ 0.84
Ptchd4B9EKX1 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ptchd4B9EKX1 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Ptchd4B9EKX1 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Ptchd4B9EKX1 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
Ptchd4B9EKX1 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Ptchd4B9EKX1 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Ptchd4B9EKX1 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ptchd4B9EKX1 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ptchd4B9EKX1 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ptchd4B9EKX1 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
Ptchd4B9EKX1 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ptchd4B9EKX1 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ptchd4B9EKX1 Gm10167-201ENSMUST00000150411 1479 ntBASIC20.3■□□□□ 0.84
Ptchd4B9EKX1 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC20.3■□□□□ 0.84
Ptchd4B9EKX1 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ptchd4B9EKX1 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ptchd4B9EKX1 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ptchd4B9EKX1 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ptchd4B9EKX1 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ptchd4B9EKX1 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ptchd4B9EKX1 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ptchd4B9EKX1 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Ptchd4B9EKX1 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ptchd4B9EKX1 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Ptchd4B9EKX1 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ptchd4B9EKX1 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Ptchd4B9EKX1 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Ptchd4B9EKX1 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC20.29■□□□□ 0.84
Ptchd4B9EKX1 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ptchd4B9EKX1 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ptchd4B9EKX1 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ptchd4B9EKX1 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Ptchd4B9EKX1 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ptchd4B9EKX1 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC20.28■□□□□ 0.84
Ptchd4B9EKX1 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ptchd4B9EKX1 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC20.28■□□□□ 0.84
Ptchd4B9EKX1 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC20.28■□□□□ 0.84
Ptchd4B9EKX1 Gm44549-201ENSMUST00000208351 577 ntBASIC20.28■□□□□ 0.84
Ptchd4B9EKX1 Gm10252-201ENSMUST00000209541 832 ntBASIC20.28■□□□□ 0.84
Ptchd4B9EKX1 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ptchd4B9EKX1 Gm10812-201ENSMUST00000099864 546 ntBASIC20.28■□□□□ 0.84
Ptchd4B9EKX1 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ptchd4B9EKX1 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ptchd4B9EKX1 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Ptchd4B9EKX1 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ptchd4B9EKX1 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Ptchd4B9EKX1 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Ptchd4B9EKX1 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ptchd4B9EKX1 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC20.27■□□□□ 0.84
Ptchd4B9EKX1 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Ptchd4B9EKX1 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ptchd4B9EKX1 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ptchd4B9EKX1 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Ptchd4B9EKX1 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC20.27■□□□□ 0.84
Ptchd4B9EKX1 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ptchd4B9EKX1 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Ptchd4B9EKX1 Dio3-201ENSMUST00000097228 1449 ntBASIC20.27■□□□□ 0.83
Ptchd4B9EKX1 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Ptchd4B9EKX1 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ptchd4B9EKX1 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Ptchd4B9EKX1 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ptchd4B9EKX1 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC20.26■□□□□ 0.83
Ptchd4B9EKX1 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC20.26■□□□□ 0.83
Ptchd4B9EKX1 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Ptchd4B9EKX1 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ptchd4B9EKX1 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Ptchd4B9EKX1 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Ptchd4B9EKX1 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ptchd4B9EKX1 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ptchd4B9EKX1 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ptchd4B9EKX1 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ptchd4B9EKX1 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ptchd4B9EKX1 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC20.25■□□□□ 0.83
Ptchd4B9EKX1 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ptchd4B9EKX1 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ptchd4B9EKX1 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ptchd4B9EKX1 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ptchd4B9EKX1 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ptchd4B9EKX1 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ptchd4B9EKX1 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.25■□□□□ 0.83
Ptchd4B9EKX1 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ptchd4B9EKX1 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Ptchd4B9EKX1 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ptchd4B9EKX1 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ptchd4B9EKX1 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ptchd4B9EKX1 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ptchd4B9EKX1 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ptchd4B9EKX1 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Ptchd4B9EKX1 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms