Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ccdc194A0A140LIT1 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Ccdc194A0A140LIT1 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Ccdc194A0A140LIT1 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Ccdc194A0A140LIT1 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Ccdc194A0A140LIT1 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ccdc194A0A140LIT1 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ccdc194A0A140LIT1 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Ccdc194A0A140LIT1 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ccdc194A0A140LIT1 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ccdc194A0A140LIT1 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC18.73■□□□□ 0.59
Ccdc194A0A140LIT1 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Ccdc194A0A140LIT1 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Ccdc194A0A140LIT1 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ccdc194A0A140LIT1 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ccdc194A0A140LIT1 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ccdc194A0A140LIT1 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Ccdc194A0A140LIT1 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
Ccdc194A0A140LIT1 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ccdc194A0A140LIT1 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ccdc194A0A140LIT1 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ccdc194A0A140LIT1 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ccdc194A0A140LIT1 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ccdc194A0A140LIT1 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
Ccdc194A0A140LIT1 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Ccdc194A0A140LIT1 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ccdc194A0A140LIT1 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ccdc194A0A140LIT1 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ccdc194A0A140LIT1 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ccdc194A0A140LIT1 Gm8493-201ENSMUST00000196881 489 ntBASIC18.72■□□□□ 0.59
Ccdc194A0A140LIT1 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC18.72■□□□□ 0.59
Ccdc194A0A140LIT1 Wdr70-203ENSMUST00000227371 1130 ntBASIC18.72■□□□□ 0.59
Ccdc194A0A140LIT1 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Ccdc194A0A140LIT1 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ccdc194A0A140LIT1 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ccdc194A0A140LIT1 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ccdc194A0A140LIT1 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC18.72■□□□□ 0.59
Ccdc194A0A140LIT1 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ccdc194A0A140LIT1 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Ccdc194A0A140LIT1 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
Ccdc194A0A140LIT1 Gm12821-201ENSMUST00000120022 600 ntBASIC18.71■□□□□ 0.59
Ccdc194A0A140LIT1 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Ccdc194A0A140LIT1 Smad6-203ENSMUST00000179458 273 ntBASIC18.71■□□□□ 0.59
Ccdc194A0A140LIT1 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ccdc194A0A140LIT1 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Ccdc194A0A140LIT1 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC18.71■□□□□ 0.59
Ccdc194A0A140LIT1 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccdc194A0A140LIT1 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccdc194A0A140LIT1 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccdc194A0A140LIT1 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccdc194A0A140LIT1 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Ccdc194A0A140LIT1 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccdc194A0A140LIT1 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Ccdc194A0A140LIT1 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccdc194A0A140LIT1 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccdc194A0A140LIT1 Rncr4-201ENSMUST00000194541 2234 ntBASIC18.7■□□□□ 0.58
Ccdc194A0A140LIT1 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccdc194A0A140LIT1 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccdc194A0A140LIT1 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccdc194A0A140LIT1 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccdc194A0A140LIT1 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC18.69■□□□□ 0.58
Ccdc194A0A140LIT1 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
Ccdc194A0A140LIT1 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ccdc194A0A140LIT1 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ccdc194A0A140LIT1 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ccdc194A0A140LIT1 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ccdc194A0A140LIT1 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ccdc194A0A140LIT1 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC18.69■□□□□ 0.58
Ccdc194A0A140LIT1 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ccdc194A0A140LIT1 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Ccdc194A0A140LIT1 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC18.69■□□□□ 0.58
Ccdc194A0A140LIT1 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ccdc194A0A140LIT1 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ccdc194A0A140LIT1 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Ccdc194A0A140LIT1 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ccdc194A0A140LIT1 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ccdc194A0A140LIT1 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ccdc194A0A140LIT1 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ccdc194A0A140LIT1 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Ccdc194A0A140LIT1 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ccdc194A0A140LIT1 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Ccdc194A0A140LIT1 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ccdc194A0A140LIT1 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ccdc194A0A140LIT1 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ccdc194A0A140LIT1 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Ccdc194A0A140LIT1 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ccdc194A0A140LIT1 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ccdc194A0A140LIT1 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ccdc194A0A140LIT1 Gm6627-201ENSMUST00000218299 2386 ntBASIC18.68■□□□□ 0.58
Ccdc194A0A140LIT1 Shroom3-211ENSMUST00000225438 5742 ntBASIC18.68■□□□□ 0.58
Ccdc194A0A140LIT1 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Ccdc194A0A140LIT1 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
Ccdc194A0A140LIT1 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ccdc194A0A140LIT1 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Ccdc194A0A140LIT1 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ccdc194A0A140LIT1 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ccdc194A0A140LIT1 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC18.67■□□□□ 0.58
Ccdc194A0A140LIT1 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Ccdc194A0A140LIT1 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Ccdc194A0A140LIT1 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms