Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav3n-3A0A0G2JEM0 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trav3n-3A0A0G2JEM0 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav3n-3A0A0G2JEM0 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav3n-3A0A0G2JEM0 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav3n-3A0A0G2JEM0 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC14.21□□□□□ -0.13
Trav3n-3A0A0G2JEM0 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC14.21□□□□□ -0.13
Trav3n-3A0A0G2JEM0 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav3n-3A0A0G2JEM0 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav3n-3A0A0G2JEM0 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav3n-3A0A0G2JEM0 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trav3n-3A0A0G2JEM0 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trav3n-3A0A0G2JEM0 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav3n-3A0A0G2JEM0 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav3n-3A0A0G2JEM0 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Trav3n-3A0A0G2JEM0 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
Trav3n-3A0A0G2JEM0 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav3n-3A0A0G2JEM0 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav3n-3A0A0G2JEM0 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav3n-3A0A0G2JEM0 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trav3n-3A0A0G2JEM0 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav3n-3A0A0G2JEM0 Cxcl14-202ENSMUST00000224801 1467 ntBASIC14.2□□□□□ -0.14
Trav3n-3A0A0G2JEM0 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trav3n-3A0A0G2JEM0 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC14.2□□□□□ -0.14
Trav3n-3A0A0G2JEM0 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC14.2□□□□□ -0.14
Trav3n-3A0A0G2JEM0 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC14.2□□□□□ -0.14
Trav3n-3A0A0G2JEM0 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Trav3n-3A0A0G2JEM0 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Trav3n-3A0A0G2JEM0 Gm43909-201ENSMUST00000203443 1876 ntBASIC14.2□□□□□ -0.14
Trav3n-3A0A0G2JEM0 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav3n-3A0A0G2JEM0 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav3n-3A0A0G2JEM0 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav3n-3A0A0G2JEM0 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav3n-3A0A0G2JEM0 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav3n-3A0A0G2JEM0 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav3n-3A0A0G2JEM0 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav3n-3A0A0G2JEM0 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav3n-3A0A0G2JEM0 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav3n-3A0A0G2JEM0 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav3n-3A0A0G2JEM0 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Trav3n-3A0A0G2JEM0 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav3n-3A0A0G2JEM0 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Trav3n-3A0A0G2JEM0 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC14.19□□□□□ -0.14
Trav3n-3A0A0G2JEM0 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Trav3n-3A0A0G2JEM0 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC14.19□□□□□ -0.14
Trav3n-3A0A0G2JEM0 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav3n-3A0A0G2JEM0 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC14.19□□□□□ -0.14
Trav3n-3A0A0G2JEM0 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav3n-3A0A0G2JEM0 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav3n-3A0A0G2JEM0 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav3n-3A0A0G2JEM0 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav3n-3A0A0G2JEM0 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav3n-3A0A0G2JEM0 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC14.19□□□□□ -0.14
Trav3n-3A0A0G2JEM0 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav3n-3A0A0G2JEM0 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav3n-3A0A0G2JEM0 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav3n-3A0A0G2JEM0 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav3n-3A0A0G2JEM0 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav3n-3A0A0G2JEM0 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav3n-3A0A0G2JEM0 Gm42922-201ENSMUST00000195887 2078 ntBASIC14.18□□□□□ -0.14
Trav3n-3A0A0G2JEM0 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC14.18□□□□□ -0.14
Trav3n-3A0A0G2JEM0 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC14.18□□□□□ -0.14
Trav3n-3A0A0G2JEM0 Gm18755-201ENSMUST00000218030 1099 ntBASIC14.18□□□□□ -0.14
Trav3n-3A0A0G2JEM0 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trav3n-3A0A0G2JEM0 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trav3n-3A0A0G2JEM0 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav3n-3A0A0G2JEM0 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trav3n-3A0A0G2JEM0 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav3n-3A0A0G2JEM0 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav3n-3A0A0G2JEM0 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav3n-3A0A0G2JEM0 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Trav3n-3A0A0G2JEM0 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav3n-3A0A0G2JEM0 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Trav3n-3A0A0G2JEM0 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav3n-3A0A0G2JEM0 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav3n-3A0A0G2JEM0 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Trav3n-3A0A0G2JEM0 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav3n-3A0A0G2JEM0 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav3n-3A0A0G2JEM0 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Trav3n-3A0A0G2JEM0 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav3n-3A0A0G2JEM0 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Trav3n-3A0A0G2JEM0 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav3n-3A0A0G2JEM0 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Trav3n-3A0A0G2JEM0 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav3n-3A0A0G2JEM0 BC021767-201ENSMUST00000126387 1716 ntBASIC14.17□□□□□ -0.14
Trav3n-3A0A0G2JEM0 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav3n-3A0A0G2JEM0 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav3n-3A0A0G2JEM0 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav3n-3A0A0G2JEM0 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav3n-3A0A0G2JEM0 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Trav3n-3A0A0G2JEM0 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav3n-3A0A0G2JEM0 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav3n-3A0A0G2JEM0 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav3n-3A0A0G2JEM0 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trav3n-3A0A0G2JEM0 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trav3n-3A0A0G2JEM0 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trav3n-3A0A0G2JEM0 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC14.16□□□□□ -0.14
Trav3n-3A0A0G2JEM0 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
Trav3n-3A0A0G2JEM0 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC14.16□□□□□ -0.14
Trav3n-3A0A0G2JEM0 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms