Protein–RNA interactions for Protein: A0A0B4J1K4

Trav19, T cell receptor alpha variable 19 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav19A0A0B4J1K4 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC14.07□□□□□ -0.16
Trav19A0A0B4J1K4 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Trav19A0A0B4J1K4 Gm22238-201ENSMUST00000175222 88 ntBASIC14.07□□□□□ -0.16
Trav19A0A0B4J1K4 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav19A0A0B4J1K4 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav19A0A0B4J1K4 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav19A0A0B4J1K4 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trav19A0A0B4J1K4 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav19A0A0B4J1K4 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav19A0A0B4J1K4 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav19A0A0B4J1K4 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trav19A0A0B4J1K4 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav19A0A0B4J1K4 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trav19A0A0B4J1K4 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav19A0A0B4J1K4 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav19A0A0B4J1K4 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav19A0A0B4J1K4 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav19A0A0B4J1K4 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC14.06□□□□□ -0.16
Trav19A0A0B4J1K4 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC14.06□□□□□ -0.16
Trav19A0A0B4J1K4 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trav19A0A0B4J1K4 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trav19A0A0B4J1K4 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav19A0A0B4J1K4 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC14.06□□□□□ -0.16
Trav19A0A0B4J1K4 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC14.06□□□□□ -0.16
Trav19A0A0B4J1K4 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trav19A0A0B4J1K4 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trav19A0A0B4J1K4 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav19A0A0B4J1K4 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav19A0A0B4J1K4 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav19A0A0B4J1K4 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav19A0A0B4J1K4 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav19A0A0B4J1K4 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav19A0A0B4J1K4 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav19A0A0B4J1K4 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trav19A0A0B4J1K4 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Trav19A0A0B4J1K4 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav19A0A0B4J1K4 Gm35558-201ENSMUST00000222675 2219 ntBASIC14.05□□□□□ -0.16
Trav19A0A0B4J1K4 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav19A0A0B4J1K4 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trav19A0A0B4J1K4 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC14.05□□□□□ -0.16
Trav19A0A0B4J1K4 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav19A0A0B4J1K4 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trav19A0A0B4J1K4 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC14.05□□□□□ -0.16
Trav19A0A0B4J1K4 Serp2-204ENSMUST00000228055 705 ntBASIC14.05□□□□□ -0.16
Trav19A0A0B4J1K4 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC14.05□□□□□ -0.16
Trav19A0A0B4J1K4 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC14.05□□□□□ -0.16
Trav19A0A0B4J1K4 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav19A0A0B4J1K4 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav19A0A0B4J1K4 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trav19A0A0B4J1K4 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav19A0A0B4J1K4 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav19A0A0B4J1K4 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Trav19A0A0B4J1K4 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav19A0A0B4J1K4 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav19A0A0B4J1K4 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav19A0A0B4J1K4 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav19A0A0B4J1K4 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav19A0A0B4J1K4 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav19A0A0B4J1K4 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav19A0A0B4J1K4 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC14.04□□□□□ -0.16
Trav19A0A0B4J1K4 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav19A0A0B4J1K4 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav19A0A0B4J1K4 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav19A0A0B4J1K4 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC14.04□□□□□ -0.16
Trav19A0A0B4J1K4 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav19A0A0B4J1K4 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav19A0A0B4J1K4 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav19A0A0B4J1K4 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav19A0A0B4J1K4 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav19A0A0B4J1K4 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav19A0A0B4J1K4 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav19A0A0B4J1K4 Gm5540-201ENSMUST00000131852 1848 ntBASIC14.04□□□□□ -0.16
Trav19A0A0B4J1K4 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav19A0A0B4J1K4 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav19A0A0B4J1K4 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav19A0A0B4J1K4 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Trav19A0A0B4J1K4 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trav19A0A0B4J1K4 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC14.03□□□□□ -0.16
Trav19A0A0B4J1K4 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trav19A0A0B4J1K4 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC14.03□□□□□ -0.16
Trav19A0A0B4J1K4 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav19A0A0B4J1K4 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav19A0A0B4J1K4 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav19A0A0B4J1K4 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC14.03□□□□□ -0.16
Trav19A0A0B4J1K4 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav19A0A0B4J1K4 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Trav19A0A0B4J1K4 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.16
Trav19A0A0B4J1K4 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav19A0A0B4J1K4 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav19A0A0B4J1K4 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trav19A0A0B4J1K4 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav19A0A0B4J1K4 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trav19A0A0B4J1K4 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav19A0A0B4J1K4 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav19A0A0B4J1K4 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav19A0A0B4J1K4 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC14.02□□□□□ -0.17
Trav19A0A0B4J1K4 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav19A0A0B4J1K4 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav19A0A0B4J1K4 Grk6-206ENSMUST00000224995 2971 ntBASIC14.02□□□□□ -0.17
Trav19A0A0B4J1K4 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms