Protein–RNA interactions for Protein: A0A0B4J1I1

Igkv16-104, Immunoglobulin kappa variable 16-104 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv16-104A0A0B4J1I1 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
Igkv16-104A0A0B4J1I1 Gm715-201ENSMUST00000117865 831 ntBASIC19.18■□□□□ 0.66
Igkv16-104A0A0B4J1I1 Gm22325-201ENSMUST00000158904 308 ntBASIC19.18■□□□□ 0.66
Igkv16-104A0A0B4J1I1 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC19.18■□□□□ 0.66
Igkv16-104A0A0B4J1I1 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Igkv16-104A0A0B4J1I1 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Igkv16-104A0A0B4J1I1 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Igkv16-104A0A0B4J1I1 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Igkv16-104A0A0B4J1I1 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Igkv16-104A0A0B4J1I1 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Igkv16-104A0A0B4J1I1 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Igkv16-104A0A0B4J1I1 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Igkv16-104A0A0B4J1I1 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Igkv16-104A0A0B4J1I1 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Igkv16-104A0A0B4J1I1 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Igkv16-104A0A0B4J1I1 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Igkv16-104A0A0B4J1I1 Gm37352-201ENSMUST00000193908 2181 ntBASIC19.17■□□□□ 0.66
Igkv16-104A0A0B4J1I1 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Igkv16-104A0A0B4J1I1 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Igkv16-104A0A0B4J1I1 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Igkv16-104A0A0B4J1I1 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Igkv16-104A0A0B4J1I1 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Igkv16-104A0A0B4J1I1 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Igkv16-104A0A0B4J1I1 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Igkv16-104A0A0B4J1I1 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Igkv16-104A0A0B4J1I1 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Igkv16-104A0A0B4J1I1 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Igkv16-104A0A0B4J1I1 Gm15378-201ENSMUST00000121894 207 ntBASIC19.16■□□□□ 0.66
Igkv16-104A0A0B4J1I1 Gm13158-201ENSMUST00000122007 736 ntBASIC19.16■□□□□ 0.66
Igkv16-104A0A0B4J1I1 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC19.16■□□□□ 0.66
Igkv16-104A0A0B4J1I1 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC19.16■□□□□ 0.66
Igkv16-104A0A0B4J1I1 AL672049.1-201ENSMUST00000197943 91 ntBASIC19.16■□□□□ 0.66
Igkv16-104A0A0B4J1I1 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC19.15■□□□□ 0.66
Igkv16-104A0A0B4J1I1 H2-K2-201ENSMUST00000174250 1049 ntBASIC19.15■□□□□ 0.66
Igkv16-104A0A0B4J1I1 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC19.15■□□□□ 0.66
Igkv16-104A0A0B4J1I1 AC163280.1-201ENSMUST00000228194 1100 ntBASIC19.15■□□□□ 0.66
Igkv16-104A0A0B4J1I1 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Igkv16-104A0A0B4J1I1 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Igkv16-104A0A0B4J1I1 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Igkv16-104A0A0B4J1I1 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC19.14■□□□□ 0.66
Igkv16-104A0A0B4J1I1 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Igkv16-104A0A0B4J1I1 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Igkv16-104A0A0B4J1I1 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC19.14■□□□□ 0.65
Igkv16-104A0A0B4J1I1 Gm7977-201ENSMUST00000193787 748 ntBASIC19.14■□□□□ 0.65
Igkv16-104A0A0B4J1I1 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.14■□□□□ 0.65
Igkv16-104A0A0B4J1I1 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC19.14■□□□□ 0.65
Igkv16-104A0A0B4J1I1 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Igkv16-104A0A0B4J1I1 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Igkv16-104A0A0B4J1I1 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Igkv16-104A0A0B4J1I1 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Igkv16-104A0A0B4J1I1 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Igkv16-104A0A0B4J1I1 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Igkv16-104A0A0B4J1I1 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Igkv16-104A0A0B4J1I1 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Igkv16-104A0A0B4J1I1 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC19.13■□□□□ 0.65
Igkv16-104A0A0B4J1I1 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Igkv16-104A0A0B4J1I1 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Igkv16-104A0A0B4J1I1 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Igkv16-104A0A0B4J1I1 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Igkv16-104A0A0B4J1I1 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Igkv16-104A0A0B4J1I1 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Igkv16-104A0A0B4J1I1 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Igkv16-104A0A0B4J1I1 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Igkv16-104A0A0B4J1I1 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Igkv16-104A0A0B4J1I1 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Igkv16-104A0A0B4J1I1 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC19.13■□□□□ 0.65
Igkv16-104A0A0B4J1I1 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Igkv16-104A0A0B4J1I1 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Igkv16-104A0A0B4J1I1 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Igkv16-104A0A0B4J1I1 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC19.13■□□□□ 0.65
Igkv16-104A0A0B4J1I1 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Igkv16-104A0A0B4J1I1 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Igkv16-104A0A0B4J1I1 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Igkv16-104A0A0B4J1I1 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Igkv16-104A0A0B4J1I1 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Igkv16-104A0A0B4J1I1 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Igkv16-104A0A0B4J1I1 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Igkv16-104A0A0B4J1I1 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Igkv16-104A0A0B4J1I1 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Igkv16-104A0A0B4J1I1 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Igkv16-104A0A0B4J1I1 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Igkv16-104A0A0B4J1I1 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC19.12■□□□□ 0.65
Igkv16-104A0A0B4J1I1 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
Igkv16-104A0A0B4J1I1 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Igkv16-104A0A0B4J1I1 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Igkv16-104A0A0B4J1I1 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Igkv16-104A0A0B4J1I1 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Igkv16-104A0A0B4J1I1 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Igkv16-104A0A0B4J1I1 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC19.11■□□□□ 0.65
Igkv16-104A0A0B4J1I1 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Igkv16-104A0A0B4J1I1 Mir1199-201ENSMUST00000117015 119 ntBASIC19.11■□□□□ 0.65
Igkv16-104A0A0B4J1I1 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC19.11■□□□□ 0.65
Igkv16-104A0A0B4J1I1 AC135963.1-201ENSMUST00000211640 717 ntBASIC19.11■□□□□ 0.65
Igkv16-104A0A0B4J1I1 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Igkv16-104A0A0B4J1I1 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Igkv16-104A0A0B4J1I1 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Igkv16-104A0A0B4J1I1 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Igkv16-104A0A0B4J1I1 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Igkv16-104A0A0B4J1I1 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Igkv16-104A0A0B4J1I1 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms