Protein–RNA interactions for Protein: A0A0A6YY38

Ighv1-42, Immunoglobulin heavy variable V1-42 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-42A0A0A6YY38 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ighv1-42A0A0A6YY38 Gm34220-201ENSMUST00000223001 2709 ntBASIC17.45■□□□□ 0.38
Ighv1-42A0A0A6YY38 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ighv1-42A0A0A6YY38 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ighv1-42A0A0A6YY38 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Ighv1-42A0A0A6YY38 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Ighv1-42A0A0A6YY38 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ighv1-42A0A0A6YY38 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ighv1-42A0A0A6YY38 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ighv1-42A0A0A6YY38 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ighv1-42A0A0A6YY38 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ighv1-42A0A0A6YY38 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC17.44■□□□□ 0.38
Ighv1-42A0A0A6YY38 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ighv1-42A0A0A6YY38 Gm44878-201ENSMUST00000205812 1295 ntBASIC17.44■□□□□ 0.38
Ighv1-42A0A0A6YY38 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Ighv1-42A0A0A6YY38 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ighv1-42A0A0A6YY38 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ighv1-42A0A0A6YY38 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ighv1-42A0A0A6YY38 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ighv1-42A0A0A6YY38 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ighv1-42A0A0A6YY38 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ighv1-42A0A0A6YY38 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC17.44■□□□□ 0.38
Ighv1-42A0A0A6YY38 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ighv1-42A0A0A6YY38 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ighv1-42A0A0A6YY38 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ighv1-42A0A0A6YY38 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ighv1-42A0A0A6YY38 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ighv1-42A0A0A6YY38 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Ighv1-42A0A0A6YY38 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ighv1-42A0A0A6YY38 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Ighv1-42A0A0A6YY38 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ighv1-42A0A0A6YY38 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ighv1-42A0A0A6YY38 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ighv1-42A0A0A6YY38 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ighv1-42A0A0A6YY38 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ighv1-42A0A0A6YY38 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC17.42■□□□□ 0.38
Ighv1-42A0A0A6YY38 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC17.42■□□□□ 0.38
Ighv1-42A0A0A6YY38 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ighv1-42A0A0A6YY38 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC17.42■□□□□ 0.38
Ighv1-42A0A0A6YY38 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ighv1-42A0A0A6YY38 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC17.42■□□□□ 0.38
Ighv1-42A0A0A6YY38 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ighv1-42A0A0A6YY38 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ighv1-42A0A0A6YY38 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ighv1-42A0A0A6YY38 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ighv1-42A0A0A6YY38 Gm37352-201ENSMUST00000193908 2181 ntBASIC17.42■□□□□ 0.38
Ighv1-42A0A0A6YY38 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ighv1-42A0A0A6YY38 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Ighv1-42A0A0A6YY38 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Ighv1-42A0A0A6YY38 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC17.41■□□□□ 0.38
Ighv1-42A0A0A6YY38 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Ighv1-42A0A0A6YY38 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ighv1-42A0A0A6YY38 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ighv1-42A0A0A6YY38 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ighv1-42A0A0A6YY38 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ighv1-42A0A0A6YY38 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ighv1-42A0A0A6YY38 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ighv1-42A0A0A6YY38 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC17.4■□□□□ 0.38
Ighv1-42A0A0A6YY38 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ighv1-42A0A0A6YY38 Gm12896-201ENSMUST00000118430 226 ntBASIC17.4■□□□□ 0.38
Ighv1-42A0A0A6YY38 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ighv1-42A0A0A6YY38 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ighv1-42A0A0A6YY38 Gm2559-201ENSMUST00000201323 363 ntBASIC17.4■□□□□ 0.38
Ighv1-42A0A0A6YY38 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ighv1-42A0A0A6YY38 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC17.4■□□□□ 0.38
Ighv1-42A0A0A6YY38 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ighv1-42A0A0A6YY38 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ighv1-42A0A0A6YY38 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Ighv1-42A0A0A6YY38 Gm10616-201ENSMUST00000205285 2127 ntBASIC17.39■□□□□ 0.38
Ighv1-42A0A0A6YY38 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Ighv1-42A0A0A6YY38 Gm43672-201ENSMUST00000199072 1731 ntBASIC17.39■□□□□ 0.37
Ighv1-42A0A0A6YY38 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ighv1-42A0A0A6YY38 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ighv1-42A0A0A6YY38 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Ighv1-42A0A0A6YY38 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Ighv1-42A0A0A6YY38 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ighv1-42A0A0A6YY38 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ighv1-42A0A0A6YY38 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Ighv1-42A0A0A6YY38 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ighv1-42A0A0A6YY38 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ighv1-42A0A0A6YY38 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC17.38■□□□□ 0.37
Ighv1-42A0A0A6YY38 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC17.38■□□□□ 0.37
Ighv1-42A0A0A6YY38 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC17.38■□□□□ 0.37
Ighv1-42A0A0A6YY38 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC17.38■□□□□ 0.37
Ighv1-42A0A0A6YY38 AC160393.1-201ENSMUST00000218378 1279 ntBASIC17.38■□□□□ 0.37
Ighv1-42A0A0A6YY38 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC17.38■□□□□ 0.37
Ighv1-42A0A0A6YY38 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ighv1-42A0A0A6YY38 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ighv1-42A0A0A6YY38 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Ighv1-42A0A0A6YY38 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ighv1-42A0A0A6YY38 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ighv1-42A0A0A6YY38 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ighv1-42A0A0A6YY38 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ighv1-42A0A0A6YY38 Gm10167-201ENSMUST00000150411 1479 ntBASIC17.37■□□□□ 0.37
Ighv1-42A0A0A6YY38 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ighv1-42A0A0A6YY38 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ighv1-42A0A0A6YY38 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ighv1-42A0A0A6YY38 Gm27275-201ENSMUST00000184318 272 ntBASIC17.37■□□□□ 0.37
Ighv1-42A0A0A6YY38 Gm44549-201ENSMUST00000208351 577 ntBASIC17.37■□□□□ 0.37
Ighv1-42A0A0A6YY38 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC17.37■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms