Protein–RNA interactions for Protein: A0A0A6YWV4

Trbc1, T cell receptor beta, constant region 1 (Fragment), mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbc1A0A0A6YWV4 Gm26571-201ENSMUST00000181399 666 ntBASIC17.25■□□□□ 0.35
Trbc1A0A0A6YWV4 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC17.25■□□□□ 0.35
Trbc1A0A0A6YWV4 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC17.25■□□□□ 0.35
Trbc1A0A0A6YWV4 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC17.25■□□□□ 0.35
Trbc1A0A0A6YWV4 AV356131-201ENSMUST00000206201 750 ntBASIC17.25■□□□□ 0.35
Trbc1A0A0A6YWV4 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Trbc1A0A0A6YWV4 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trbc1A0A0A6YWV4 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trbc1A0A0A6YWV4 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trbc1A0A0A6YWV4 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trbc1A0A0A6YWV4 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trbc1A0A0A6YWV4 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC17.25■□□□□ 0.35
Trbc1A0A0A6YWV4 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trbc1A0A0A6YWV4 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trbc1A0A0A6YWV4 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trbc1A0A0A6YWV4 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trbc1A0A0A6YWV4 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trbc1A0A0A6YWV4 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trbc1A0A0A6YWV4 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trbc1A0A0A6YWV4 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC17.24■□□□□ 0.35
Trbc1A0A0A6YWV4 Gm7860-201ENSMUST00000121190 879 ntBASIC17.24■□□□□ 0.35
Trbc1A0A0A6YWV4 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC17.24■□□□□ 0.35
Trbc1A0A0A6YWV4 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC17.24■□□□□ 0.35
Trbc1A0A0A6YWV4 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trbc1A0A0A6YWV4 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC17.24■□□□□ 0.35
Trbc1A0A0A6YWV4 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trbc1A0A0A6YWV4 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trbc1A0A0A6YWV4 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trbc1A0A0A6YWV4 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trbc1A0A0A6YWV4 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC17.24■□□□□ 0.35
Trbc1A0A0A6YWV4 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trbc1A0A0A6YWV4 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trbc1A0A0A6YWV4 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trbc1A0A0A6YWV4 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trbc1A0A0A6YWV4 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trbc1A0A0A6YWV4 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trbc1A0A0A6YWV4 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trbc1A0A0A6YWV4 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC17.23■□□□□ 0.35
Trbc1A0A0A6YWV4 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC17.23■□□□□ 0.35
Trbc1A0A0A6YWV4 Gm38205-201ENSMUST00000192243 258 ntBASIC17.23■□□□□ 0.35
Trbc1A0A0A6YWV4 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC17.23■□□□□ 0.35
Trbc1A0A0A6YWV4 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trbc1A0A0A6YWV4 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trbc1A0A0A6YWV4 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Trbc1A0A0A6YWV4 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC17.23■□□□□ 0.35
Trbc1A0A0A6YWV4 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trbc1A0A0A6YWV4 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trbc1A0A0A6YWV4 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Trbc1A0A0A6YWV4 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trbc1A0A0A6YWV4 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trbc1A0A0A6YWV4 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC17.22■□□□□ 0.35
Trbc1A0A0A6YWV4 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trbc1A0A0A6YWV4 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trbc1A0A0A6YWV4 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trbc1A0A0A6YWV4 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trbc1A0A0A6YWV4 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trbc1A0A0A6YWV4 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trbc1A0A0A6YWV4 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trbc1A0A0A6YWV4 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.22■□□□□ 0.35
Trbc1A0A0A6YWV4 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trbc1A0A0A6YWV4 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trbc1A0A0A6YWV4 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Trbc1A0A0A6YWV4 Gm35558-201ENSMUST00000222675 2219 ntBASIC17.21■□□□□ 0.35
Trbc1A0A0A6YWV4 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trbc1A0A0A6YWV4 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trbc1A0A0A6YWV4 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
Trbc1A0A0A6YWV4 Gm13146-201ENSMUST00000118508 780 ntBASIC17.21■□□□□ 0.35
Trbc1A0A0A6YWV4 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trbc1A0A0A6YWV4 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC17.21■□□□□ 0.35
Trbc1A0A0A6YWV4 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trbc1A0A0A6YWV4 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trbc1A0A0A6YWV4 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trbc1A0A0A6YWV4 Gm32699-201ENSMUST00000221728 1988 ntBASIC17.2■□□□□ 0.34
Trbc1A0A0A6YWV4 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trbc1A0A0A6YWV4 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Trbc1A0A0A6YWV4 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trbc1A0A0A6YWV4 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Trbc1A0A0A6YWV4 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
Trbc1A0A0A6YWV4 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trbc1A0A0A6YWV4 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trbc1A0A0A6YWV4 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trbc1A0A0A6YWV4 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trbc1A0A0A6YWV4 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trbc1A0A0A6YWV4 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trbc1A0A0A6YWV4 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trbc1A0A0A6YWV4 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trbc1A0A0A6YWV4 Gm27405-201ENSMUST00000184201 112 ntBASIC17.2■□□□□ 0.34
Trbc1A0A0A6YWV4 CT010467.1-202ENSMUST00000205406 714 ntBASIC17.2■□□□□ 0.34
Trbc1A0A0A6YWV4 Slc35b2-207ENSMUST00000226086 850 ntBASIC17.2■□□□□ 0.34
Trbc1A0A0A6YWV4 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trbc1A0A0A6YWV4 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Trbc1A0A0A6YWV4 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trbc1A0A0A6YWV4 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trbc1A0A0A6YWV4 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Trbc1A0A0A6YWV4 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trbc1A0A0A6YWV4 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trbc1A0A0A6YWV4 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trbc1A0A0A6YWV4 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trbc1A0A0A6YWV4 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC17.19■□□□□ 0.34
Trbc1A0A0A6YWV4 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms