Protein–RNA interactions for Protein: A0A0A6YW39

Ighv16-1, Immunoglobulin heavy variable 16-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv16-1A0A0A6YW39 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ighv16-1A0A0A6YW39 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Ighv16-1A0A0A6YW39 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ighv16-1A0A0A6YW39 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ighv16-1A0A0A6YW39 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ighv16-1A0A0A6YW39 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ighv16-1A0A0A6YW39 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ighv16-1A0A0A6YW39 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC17.36■□□□□ 0.37
Ighv16-1A0A0A6YW39 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ighv16-1A0A0A6YW39 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ighv16-1A0A0A6YW39 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ighv16-1A0A0A6YW39 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC17.35■□□□□ 0.37
Ighv16-1A0A0A6YW39 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ighv16-1A0A0A6YW39 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ighv16-1A0A0A6YW39 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ighv16-1A0A0A6YW39 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ighv16-1A0A0A6YW39 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ighv16-1A0A0A6YW39 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ighv16-1A0A0A6YW39 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ighv16-1A0A0A6YW39 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ighv16-1A0A0A6YW39 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ighv16-1A0A0A6YW39 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ighv16-1A0A0A6YW39 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC17.34■□□□□ 0.37
Ighv16-1A0A0A6YW39 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ighv16-1A0A0A6YW39 Gm6420-201ENSMUST00000193885 723 ntBASIC17.34■□□□□ 0.37
Ighv16-1A0A0A6YW39 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Ighv16-1A0A0A6YW39 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC17.34■□□□□ 0.37
Ighv16-1A0A0A6YW39 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ighv16-1A0A0A6YW39 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ighv16-1A0A0A6YW39 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Ighv16-1A0A0A6YW39 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Ighv16-1A0A0A6YW39 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ighv16-1A0A0A6YW39 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ighv16-1A0A0A6YW39 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Ighv16-1A0A0A6YW39 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ighv16-1A0A0A6YW39 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC17.33■□□□□ 0.36
Ighv16-1A0A0A6YW39 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ighv16-1A0A0A6YW39 Nespas-201ENSMUST00000143738 1083 ntBASIC17.33■□□□□ 0.36
Ighv16-1A0A0A6YW39 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Ighv16-1A0A0A6YW39 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Ighv16-1A0A0A6YW39 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Ighv16-1A0A0A6YW39 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ighv16-1A0A0A6YW39 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
Ighv16-1A0A0A6YW39 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ighv16-1A0A0A6YW39 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ighv16-1A0A0A6YW39 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ighv16-1A0A0A6YW39 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ighv16-1A0A0A6YW39 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ighv16-1A0A0A6YW39 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC17.32■□□□□ 0.36
Ighv16-1A0A0A6YW39 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC17.32■□□□□ 0.36
Ighv16-1A0A0A6YW39 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ighv16-1A0A0A6YW39 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ighv16-1A0A0A6YW39 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ighv16-1A0A0A6YW39 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ighv16-1A0A0A6YW39 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Ighv16-1A0A0A6YW39 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Ighv16-1A0A0A6YW39 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Ighv16-1A0A0A6YW39 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ighv16-1A0A0A6YW39 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Ighv16-1A0A0A6YW39 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ighv16-1A0A0A6YW39 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ighv16-1A0A0A6YW39 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ighv16-1A0A0A6YW39 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ighv16-1A0A0A6YW39 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Ighv16-1A0A0A6YW39 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Ighv16-1A0A0A6YW39 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Ighv16-1A0A0A6YW39 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ighv16-1A0A0A6YW39 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ighv16-1A0A0A6YW39 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ighv16-1A0A0A6YW39 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ighv16-1A0A0A6YW39 Gm26971-201ENSMUST00000182423 1072 ntBASIC17.31■□□□□ 0.36
Ighv16-1A0A0A6YW39 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ighv16-1A0A0A6YW39 Gm37179-201ENSMUST00000194862 823 ntBASIC17.31■□□□□ 0.36
Ighv16-1A0A0A6YW39 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC17.31■□□□□ 0.36
Ighv16-1A0A0A6YW39 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC17.31■□□□□ 0.36
Ighv16-1A0A0A6YW39 AC124603.1-201ENSMUST00000223843 308 ntBASIC17.31■□□□□ 0.36
Ighv16-1A0A0A6YW39 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ighv16-1A0A0A6YW39 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ighv16-1A0A0A6YW39 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
Ighv16-1A0A0A6YW39 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ighv16-1A0A0A6YW39 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ighv16-1A0A0A6YW39 Gm18688-201ENSMUST00000204695 1859 ntBASIC17.31■□□□□ 0.36
Ighv16-1A0A0A6YW39 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ighv16-1A0A0A6YW39 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC17.31■□□□□ 0.36
Ighv16-1A0A0A6YW39 AC126028.2-201ENSMUST00000228100 1833 ntBASIC17.31■□□□□ 0.36
Ighv16-1A0A0A6YW39 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC17.3■□□□□ 0.36
Ighv16-1A0A0A6YW39 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ighv16-1A0A0A6YW39 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Ighv16-1A0A0A6YW39 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ighv16-1A0A0A6YW39 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ighv16-1A0A0A6YW39 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ighv16-1A0A0A6YW39 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Ighv16-1A0A0A6YW39 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ighv16-1A0A0A6YW39 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ighv16-1A0A0A6YW39 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC17.3■□□□□ 0.36
Ighv16-1A0A0A6YW39 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Ighv16-1A0A0A6YW39 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ighv16-1A0A0A6YW39 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ighv16-1A0A0A6YW39 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ighv16-1A0A0A6YW39 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC17.3■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms