Protein–RNA interactions for Protein: A0A075B6B9

Trav6d-5, T cell receptor alpha variable 6D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-5A0A075B6B9 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav6d-5A0A075B6B9 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC15.21■□□□□ 0.03
Trav6d-5A0A075B6B9 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trav6d-5A0A075B6B9 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Trav6d-5A0A075B6B9 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav6d-5A0A075B6B9 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav6d-5A0A075B6B9 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Trav6d-5A0A075B6B9 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trav6d-5A0A075B6B9 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav6d-5A0A075B6B9 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav6d-5A0A075B6B9 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trav6d-5A0A075B6B9 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Trav6d-5A0A075B6B9 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Trav6d-5A0A075B6B9 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trav6d-5A0A075B6B9 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav6d-5A0A075B6B9 Gm43702-201ENSMUST00000198772 2546 ntBASIC15.2■□□□□ 0.02
Trav6d-5A0A075B6B9 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav6d-5A0A075B6B9 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trav6d-5A0A075B6B9 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Trav6d-5A0A075B6B9 Gm45906-201ENSMUST00000208911 1430 ntBASIC15.19■□□□□ 0.02
Trav6d-5A0A075B6B9 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav6d-5A0A075B6B9 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trav6d-5A0A075B6B9 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trav6d-5A0A075B6B9 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trav6d-5A0A075B6B9 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav6d-5A0A075B6B9 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav6d-5A0A075B6B9 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC15.19■□□□□ 0.02
Trav6d-5A0A075B6B9 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Trav6d-5A0A075B6B9 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav6d-5A0A075B6B9 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC15.19■□□□□ 0.02
Trav6d-5A0A075B6B9 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav6d-5A0A075B6B9 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trav6d-5A0A075B6B9 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC15.18■□□□□ 0.02
Trav6d-5A0A075B6B9 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav6d-5A0A075B6B9 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav6d-5A0A075B6B9 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav6d-5A0A075B6B9 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC15.18■□□□□ 0.02
Trav6d-5A0A075B6B9 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav6d-5A0A075B6B9 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trav6d-5A0A075B6B9 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Trav6d-5A0A075B6B9 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC15.18■□□□□ 0.02
Trav6d-5A0A075B6B9 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav6d-5A0A075B6B9 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Trav6d-5A0A075B6B9 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trav6d-5A0A075B6B9 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trav6d-5A0A075B6B9 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6d-5A0A075B6B9 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6d-5A0A075B6B9 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6d-5A0A075B6B9 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6d-5A0A075B6B9 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC15.17■□□□□ 0.02
Trav6d-5A0A075B6B9 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6d-5A0A075B6B9 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6d-5A0A075B6B9 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6d-5A0A075B6B9 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6d-5A0A075B6B9 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Trav6d-5A0A075B6B9 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6d-5A0A075B6B9 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6d-5A0A075B6B9 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6d-5A0A075B6B9 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6d-5A0A075B6B9 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6d-5A0A075B6B9 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6d-5A0A075B6B9 Cap2-205ENSMUST00000225824 1634 ntBASIC15.17■□□□□ 0.02
Trav6d-5A0A075B6B9 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6d-5A0A075B6B9 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav6d-5A0A075B6B9 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Trav6d-5A0A075B6B9 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav6d-5A0A075B6B9 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav6d-5A0A075B6B9 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav6d-5A0A075B6B9 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav6d-5A0A075B6B9 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trav6d-5A0A075B6B9 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav6d-5A0A075B6B9 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav6d-5A0A075B6B9 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav6d-5A0A075B6B9 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav6d-5A0A075B6B9 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav6d-5A0A075B6B9 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav6d-5A0A075B6B9 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC15.16■□□□□ 0.02
Trav6d-5A0A075B6B9 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Trav6d-5A0A075B6B9 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav6d-5A0A075B6B9 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav6d-5A0A075B6B9 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
Trav6d-5A0A075B6B9 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Trav6d-5A0A075B6B9 Gm5828-201ENSMUST00000071842 1860 ntBASIC15.16■□□□□ 0.02
Trav6d-5A0A075B6B9 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav6d-5A0A075B6B9 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
Trav6d-5A0A075B6B9 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav6d-5A0A075B6B9 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC15.15■□□□□ 0.02
Trav6d-5A0A075B6B9 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav6d-5A0A075B6B9 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav6d-5A0A075B6B9 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Trav6d-5A0A075B6B9 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC15.15■□□□□ 0.02
Trav6d-5A0A075B6B9 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trav6d-5A0A075B6B9 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav6d-5A0A075B6B9 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Trav6d-5A0A075B6B9 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav6d-5A0A075B6B9 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC15.15■□□□□ 0.02
Trav6d-5A0A075B6B9 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC15.15■□□□□ 0.02
Trav6d-5A0A075B6B9 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav6d-5A0A075B6B9 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav6d-5A0A075B6B9 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms