Protein–RNA interactions for Protein: A0A075B6B4

Trav6-4, T cell receptor alpha variable 6-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-4A0A075B6B4 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6-4A0A075B6B4 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Trav6-4A0A075B6B4 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Trav6-4A0A075B6B4 Gm13234-201ENSMUST00000120010 747 ntBASIC14.5□□□□□ -0.09
Trav6-4A0A075B6B4 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6-4A0A075B6B4 Gm38205-201ENSMUST00000192243 258 ntBASIC14.5□□□□□ -0.09
Trav6-4A0A075B6B4 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6-4A0A075B6B4 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6-4A0A075B6B4 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6-4A0A075B6B4 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC14.5□□□□□ -0.09
Trav6-4A0A075B6B4 Gm37352-201ENSMUST00000193908 2181 ntBASIC14.5□□□□□ -0.09
Trav6-4A0A075B6B4 Gm5540-201ENSMUST00000131852 1848 ntBASIC14.5□□□□□ -0.09
Trav6-4A0A075B6B4 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6-4A0A075B6B4 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6-4A0A075B6B4 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6-4A0A075B6B4 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC14.49□□□□□ -0.09
Trav6-4A0A075B6B4 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6-4A0A075B6B4 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Trav6-4A0A075B6B4 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6-4A0A075B6B4 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6-4A0A075B6B4 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Trav6-4A0A075B6B4 Gm18284-201ENSMUST00000172604 624 ntBASIC14.49□□□□□ -0.09
Trav6-4A0A075B6B4 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC14.49□□□□□ -0.09
Trav6-4A0A075B6B4 AC124603.1-201ENSMUST00000223843 308 ntBASIC14.49□□□□□ -0.09
Trav6-4A0A075B6B4 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
Trav6-4A0A075B6B4 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC14.49□□□□□ -0.09
Trav6-4A0A075B6B4 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Trav6-4A0A075B6B4 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Trav6-4A0A075B6B4 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6-4A0A075B6B4 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Trav6-4A0A075B6B4 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6-4A0A075B6B4 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6-4A0A075B6B4 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6-4A0A075B6B4 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav6-4A0A075B6B4 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav6-4A0A075B6B4 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trav6-4A0A075B6B4 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav6-4A0A075B6B4 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav6-4A0A075B6B4 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav6-4A0A075B6B4 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav6-4A0A075B6B4 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC14.48□□□□□ -0.09
Trav6-4A0A075B6B4 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav6-4A0A075B6B4 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Trav6-4A0A075B6B4 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav6-4A0A075B6B4 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Trav6-4A0A075B6B4 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav6-4A0A075B6B4 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav6-4A0A075B6B4 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6-4A0A075B6B4 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6-4A0A075B6B4 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6-4A0A075B6B4 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC14.47□□□□□ -0.09
Trav6-4A0A075B6B4 Gm42642-201ENSMUST00000200683 355 ntBASIC14.47□□□□□ -0.09
Trav6-4A0A075B6B4 Gm18671-201ENSMUST00000214826 683 ntBASIC14.47□□□□□ -0.09
Trav6-4A0A075B6B4 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6-4A0A075B6B4 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6-4A0A075B6B4 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6-4A0A075B6B4 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6-4A0A075B6B4 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav6-4A0A075B6B4 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC14.46□□□□□ -0.09
Trav6-4A0A075B6B4 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trav6-4A0A075B6B4 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav6-4A0A075B6B4 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trav6-4A0A075B6B4 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav6-4A0A075B6B4 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav6-4A0A075B6B4 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trav6-4A0A075B6B4 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC14.46□□□□□ -0.09
Trav6-4A0A075B6B4 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trav6-4A0A075B6B4 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC14.46□□□□□ -0.09
Trav6-4A0A075B6B4 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
Trav6-4A0A075B6B4 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC14.46□□□□□ -0.09
Trav6-4A0A075B6B4 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav6-4A0A075B6B4 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav6-4A0A075B6B4 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav6-4A0A075B6B4 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Trav6-4A0A075B6B4 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Trav6-4A0A075B6B4 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav6-4A0A075B6B4 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trav6-4A0A075B6B4 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trav6-4A0A075B6B4 Gm27032-201ENSMUST00000183124 1116 ntBASIC14.45□□□□□ -0.1
Trav6-4A0A075B6B4 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trav6-4A0A075B6B4 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav6-4A0A075B6B4 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav6-4A0A075B6B4 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav6-4A0A075B6B4 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav6-4A0A075B6B4 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trav6-4A0A075B6B4 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav6-4A0A075B6B4 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav6-4A0A075B6B4 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav6-4A0A075B6B4 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav6-4A0A075B6B4 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav6-4A0A075B6B4 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
Trav6-4A0A075B6B4 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav6-4A0A075B6B4 Gm8495-201ENSMUST00000188740 694 ntBASIC14.44□□□□□ -0.1
Trav6-4A0A075B6B4 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC14.44□□□□□ -0.1
Trav6-4A0A075B6B4 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav6-4A0A075B6B4 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav6-4A0A075B6B4 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trav6-4A0A075B6B4 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav6-4A0A075B6B4 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav6-4A0A075B6B4 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 14 ms