Protein–RNA interactions for Protein: A0A075B6A6

Trav6n-7, T cell receptor alpha variable 6N-7 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-7A0A075B6A6 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav6n-7A0A075B6A6 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav6n-7A0A075B6A6 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Trav6n-7A0A075B6A6 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav6n-7A0A075B6A6 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav6n-7A0A075B6A6 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav6n-7A0A075B6A6 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav6n-7A0A075B6A6 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav6n-7A0A075B6A6 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav6n-7A0A075B6A6 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav6n-7A0A075B6A6 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav6n-7A0A075B6A6 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav6n-7A0A075B6A6 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Trav6n-7A0A075B6A6 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
Trav6n-7A0A075B6A6 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav6n-7A0A075B6A6 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC15.96■□□□□ 0.15
Trav6n-7A0A075B6A6 Gm42569-201ENSMUST00000200539 472 ntBASIC15.96■□□□□ 0.15
Trav6n-7A0A075B6A6 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav6n-7A0A075B6A6 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav6n-7A0A075B6A6 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav6n-7A0A075B6A6 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav6n-7A0A075B6A6 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav6n-7A0A075B6A6 AC126028.2-201ENSMUST00000228100 1833 ntBASIC15.96■□□□□ 0.14
Trav6n-7A0A075B6A6 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.14
Trav6n-7A0A075B6A6 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Trav6n-7A0A075B6A6 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav6n-7A0A075B6A6 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Trav6n-7A0A075B6A6 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav6n-7A0A075B6A6 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC15.95■□□□□ 0.14
Trav6n-7A0A075B6A6 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Trav6n-7A0A075B6A6 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Trav6n-7A0A075B6A6 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav6n-7A0A075B6A6 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Trav6n-7A0A075B6A6 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav6n-7A0A075B6A6 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Trav6n-7A0A075B6A6 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav6n-7A0A075B6A6 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav6n-7A0A075B6A6 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC15.94■□□□□ 0.14
Trav6n-7A0A075B6A6 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav6n-7A0A075B6A6 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Trav6n-7A0A075B6A6 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav6n-7A0A075B6A6 Gm7514-201ENSMUST00000209475 934 ntBASIC15.94■□□□□ 0.14
Trav6n-7A0A075B6A6 Ap3s1-204ENSMUST00000225520 957 ntBASIC15.94■□□□□ 0.14
Trav6n-7A0A075B6A6 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Trav6n-7A0A075B6A6 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav6n-7A0A075B6A6 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trav6n-7A0A075B6A6 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav6n-7A0A075B6A6 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trav6n-7A0A075B6A6 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav6n-7A0A075B6A6 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav6n-7A0A075B6A6 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC15.94■□□□□ 0.14
Trav6n-7A0A075B6A6 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav6n-7A0A075B6A6 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Trav6n-7A0A075B6A6 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav6n-7A0A075B6A6 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav6n-7A0A075B6A6 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trav6n-7A0A075B6A6 Gm13534-201ENSMUST00000121169 513 ntBASIC15.93■□□□□ 0.14
Trav6n-7A0A075B6A6 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Trav6n-7A0A075B6A6 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav6n-7A0A075B6A6 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Trav6n-7A0A075B6A6 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Trav6n-7A0A075B6A6 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC15.93■□□□□ 0.14
Trav6n-7A0A075B6A6 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Trav6n-7A0A075B6A6 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav6n-7A0A075B6A6 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav6n-7A0A075B6A6 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav6n-7A0A075B6A6 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav6n-7A0A075B6A6 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav6n-7A0A075B6A6 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC15.93■□□□□ 0.14
Trav6n-7A0A075B6A6 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav6n-7A0A075B6A6 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav6n-7A0A075B6A6 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav6n-7A0A075B6A6 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav6n-7A0A075B6A6 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav6n-7A0A075B6A6 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trav6n-7A0A075B6A6 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trav6n-7A0A075B6A6 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC15.92■□□□□ 0.14
Trav6n-7A0A075B6A6 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav6n-7A0A075B6A6 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav6n-7A0A075B6A6 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Trav6n-7A0A075B6A6 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav6n-7A0A075B6A6 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav6n-7A0A075B6A6 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav6n-7A0A075B6A6 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trav6n-7A0A075B6A6 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav6n-7A0A075B6A6 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trav6n-7A0A075B6A6 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav6n-7A0A075B6A6 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav6n-7A0A075B6A6 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Trav6n-7A0A075B6A6 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav6n-7A0A075B6A6 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav6n-7A0A075B6A6 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
Trav6n-7A0A075B6A6 Gm10849-201ENSMUST00000100397 618 ntBASIC15.91■□□□□ 0.14
Trav6n-7A0A075B6A6 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav6n-7A0A075B6A6 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
Trav6n-7A0A075B6A6 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC15.91■□□□□ 0.14
Trav6n-7A0A075B6A6 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav6n-7A0A075B6A6 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav6n-7A0A075B6A6 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav6n-7A0A075B6A6 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms