Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav18A0A075B656 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
Trav18A0A075B656 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav18A0A075B656 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav18A0A075B656 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC15.39■□□□□ 0.05
Trav18A0A075B656 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC15.39■□□□□ 0.05
Trav18A0A075B656 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav18A0A075B656 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav18A0A075B656 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trav18A0A075B656 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trav18A0A075B656 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav18A0A075B656 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav18A0A075B656 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav18A0A075B656 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav18A0A075B656 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav18A0A075B656 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav18A0A075B656 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav18A0A075B656 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav18A0A075B656 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav18A0A075B656 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav18A0A075B656 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trav18A0A075B656 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav18A0A075B656 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trav18A0A075B656 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav18A0A075B656 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Trav18A0A075B656 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Trav18A0A075B656 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav18A0A075B656 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trav18A0A075B656 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC15.38■□□□□ 0.05
Trav18A0A075B656 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
Trav18A0A075B656 Gm13241-201ENSMUST00000094493 780 ntBASIC15.38■□□□□ 0.05
Trav18A0A075B656 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trav18A0A075B656 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav18A0A075B656 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav18A0A075B656 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC15.38■□□□□ 0.05
Trav18A0A075B656 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav18A0A075B656 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Trav18A0A075B656 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC15.37■□□□□ 0.05
Trav18A0A075B656 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav18A0A075B656 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav18A0A075B656 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC15.37■□□□□ 0.05
Trav18A0A075B656 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trav18A0A075B656 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav18A0A075B656 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav18A0A075B656 Mir7075-201ENSMUST00000184187 82 ntBASIC15.37■□□□□ 0.05
Trav18A0A075B656 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav18A0A075B656 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC15.37■□□□□ 0.05
Trav18A0A075B656 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC15.37■□□□□ 0.05
Trav18A0A075B656 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav18A0A075B656 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav18A0A075B656 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav18A0A075B656 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav18A0A075B656 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav18A0A075B656 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav18A0A075B656 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav18A0A075B656 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav18A0A075B656 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Trav18A0A075B656 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav18A0A075B656 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC15.36■□□□□ 0.05
Trav18A0A075B656 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trav18A0A075B656 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav18A0A075B656 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trav18A0A075B656 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trav18A0A075B656 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav18A0A075B656 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav18A0A075B656 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Trav18A0A075B656 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Trav18A0A075B656 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav18A0A075B656 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC15.36■□□□□ 0.05
Trav18A0A075B656 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav18A0A075B656 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC15.36■□□□□ 0.05
Trav18A0A075B656 Gm11421-201ENSMUST00000122124 294 ntBASIC15.36■□□□□ 0.05
Trav18A0A075B656 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trav18A0A075B656 AC137127.1-201ENSMUST00000213466 1078 ntBASIC15.36■□□□□ 0.05
Trav18A0A075B656 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC15.36■□□□□ 0.05
Trav18A0A075B656 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC15.36■□□□□ 0.05
Trav18A0A075B656 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC15.36■□□□□ 0.05
Trav18A0A075B656 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav18A0A075B656 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trav18A0A075B656 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Trav18A0A075B656 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trav18A0A075B656 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Trav18A0A075B656 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav18A0A075B656 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav18A0A075B656 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav18A0A075B656 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav18A0A075B656 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav18A0A075B656 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav18A0A075B656 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Trav18A0A075B656 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC15.35■□□□□ 0.05
Trav18A0A075B656 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trav18A0A075B656 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav18A0A075B656 Smad6-203ENSMUST00000179458 273 ntBASIC15.35■□□□□ 0.05
Trav18A0A075B656 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav18A0A075B656 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav18A0A075B656 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav18A0A075B656 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav18A0A075B656 Gm43034-201ENSMUST00000198678 1364 ntBASIC15.35■□□□□ 0.05
Trav18A0A075B656 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav18A0A075B656 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms