Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav5-4A0A075B652 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav5-4A0A075B652 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Trav5-4A0A075B652 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trav5-4A0A075B652 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav5-4A0A075B652 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav5-4A0A075B652 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Trav5-4A0A075B652 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC15.67■□□□□ 0.1
Trav5-4A0A075B652 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC15.67■□□□□ 0.1
Trav5-4A0A075B652 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC15.67■□□□□ 0.1
Trav5-4A0A075B652 Appbp2os-202ENSMUST00000206972 447 ntBASIC15.67■□□□□ 0.1
Trav5-4A0A075B652 AC124603.1-201ENSMUST00000223843 308 ntBASIC15.67■□□□□ 0.1
Trav5-4A0A075B652 Gm18688-201ENSMUST00000204695 1859 ntBASIC15.67■□□□□ 0.1
Trav5-4A0A075B652 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav5-4A0A075B652 Gm5784-201ENSMUST00000179344 2478 ntBASIC15.67■□□□□ 0.1
Trav5-4A0A075B652 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC15.67■□□□□ 0.1
Trav5-4A0A075B652 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC15.66■□□□□ 0.1
Trav5-4A0A075B652 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav5-4A0A075B652 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav5-4A0A075B652 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav5-4A0A075B652 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trav5-4A0A075B652 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Trav5-4A0A075B652 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav5-4A0A075B652 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
Trav5-4A0A075B652 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav5-4A0A075B652 Gm11421-201ENSMUST00000122124 294 ntBASIC15.66■□□□□ 0.1
Trav5-4A0A075B652 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trav5-4A0A075B652 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav5-4A0A075B652 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
Trav5-4A0A075B652 Gm27454-201ENSMUST00000185090 204 ntBASIC15.66■□□□□ 0.1
Trav5-4A0A075B652 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC15.66■□□□□ 0.1
Trav5-4A0A075B652 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav5-4A0A075B652 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav5-4A0A075B652 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC15.66■□□□□ 0.1
Trav5-4A0A075B652 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav5-4A0A075B652 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav5-4A0A075B652 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav5-4A0A075B652 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav5-4A0A075B652 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav5-4A0A075B652 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
Trav5-4A0A075B652 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav5-4A0A075B652 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav5-4A0A075B652 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Trav5-4A0A075B652 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav5-4A0A075B652 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav5-4A0A075B652 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trav5-4A0A075B652 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav5-4A0A075B652 Smad6-203ENSMUST00000179458 273 ntBASIC15.65■□□□□ 0.1
Trav5-4A0A075B652 AC137127.1-201ENSMUST00000213466 1078 ntBASIC15.65■□□□□ 0.1
Trav5-4A0A075B652 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav5-4A0A075B652 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav5-4A0A075B652 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav5-4A0A075B652 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav5-4A0A075B652 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav5-4A0A075B652 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav5-4A0A075B652 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Trav5-4A0A075B652 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trav5-4A0A075B652 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav5-4A0A075B652 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Trav5-4A0A075B652 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav5-4A0A075B652 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav5-4A0A075B652 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav5-4A0A075B652 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Trav5-4A0A075B652 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav5-4A0A075B652 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav5-4A0A075B652 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav5-4A0A075B652 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav5-4A0A075B652 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav5-4A0A075B652 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav5-4A0A075B652 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trav5-4A0A075B652 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Trav5-4A0A075B652 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav5-4A0A075B652 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Trav5-4A0A075B652 Gm43173-201ENSMUST00000202246 593 ntBASIC15.63■□□□□ 0.09
Trav5-4A0A075B652 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav5-4A0A075B652 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav5-4A0A075B652 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav5-4A0A075B652 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav5-4A0A075B652 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav5-4A0A075B652 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trav5-4A0A075B652 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav5-4A0A075B652 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC15.63■□□□□ 0.09
Trav5-4A0A075B652 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav5-4A0A075B652 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC15.63■□□□□ 0.09
Trav5-4A0A075B652 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav5-4A0A075B652 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trav5-4A0A075B652 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav5-4A0A075B652 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav5-4A0A075B652 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
Trav5-4A0A075B652 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC15.62■□□□□ 0.09
Trav5-4A0A075B652 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav5-4A0A075B652 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC15.62■□□□□ 0.09
Trav5-4A0A075B652 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav5-4A0A075B652 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trav5-4A0A075B652 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav5-4A0A075B652 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav5-4A0A075B652 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav5-4A0A075B652 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC15.62■□□□□ 0.09
Trav5-4A0A075B652 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav5-4A0A075B652 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 102.2 ms