Protein–RNA interactions for Protein: A0A075B639

Trav6-7-dv9, T cell receptor alpha variable 6-7-DV9 (Fragment), mousemouse

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-7-dv9A0A075B639 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav6-7-dv9A0A075B639 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav6-7-dv9A0A075B639 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav6-7-dv9A0A075B639 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav6-7-dv9A0A075B639 Gm14281-201ENSMUST00000121700 1294 ntBASIC16.69■□□□□ 0.26
Trav6-7-dv9A0A075B639 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trav6-7-dv9A0A075B639 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC16.69■□□□□ 0.26
Trav6-7-dv9A0A075B639 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trav6-7-dv9A0A075B639 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav6-7-dv9A0A075B639 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trav6-7-dv9A0A075B639 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC16.69■□□□□ 0.26
Trav6-7-dv9A0A075B639 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trav6-7-dv9A0A075B639 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav6-7-dv9A0A075B639 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav6-7-dv9A0A075B639 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav6-7-dv9A0A075B639 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav6-7-dv9A0A075B639 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trav6-7-dv9A0A075B639 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav6-7-dv9A0A075B639 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav6-7-dv9A0A075B639 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav6-7-dv9A0A075B639 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trav6-7-dv9A0A075B639 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trav6-7-dv9A0A075B639 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trav6-7-dv9A0A075B639 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
Trav6-7-dv9A0A075B639 Gm43060-201ENSMUST00000200621 289 ntBASIC16.68■□□□□ 0.26
Trav6-7-dv9A0A075B639 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav6-7-dv9A0A075B639 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC16.68■□□□□ 0.26
Trav6-7-dv9A0A075B639 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trav6-7-dv9A0A075B639 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav6-7-dv9A0A075B639 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC16.68■□□□□ 0.26
Trav6-7-dv9A0A075B639 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav6-7-dv9A0A075B639 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trav6-7-dv9A0A075B639 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Trav6-7-dv9A0A075B639 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav6-7-dv9A0A075B639 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav6-7-dv9A0A075B639 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav6-7-dv9A0A075B639 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav6-7-dv9A0A075B639 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav6-7-dv9A0A075B639 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav6-7-dv9A0A075B639 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trav6-7-dv9A0A075B639 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav6-7-dv9A0A075B639 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav6-7-dv9A0A075B639 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav6-7-dv9A0A075B639 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Trav6-7-dv9A0A075B639 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trav6-7-dv9A0A075B639 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Trav6-7-dv9A0A075B639 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC16.67■□□□□ 0.26
Trav6-7-dv9A0A075B639 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC16.67■□□□□ 0.26
Trav6-7-dv9A0A075B639 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trav6-7-dv9A0A075B639 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav6-7-dv9A0A075B639 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav6-7-dv9A0A075B639 Rncr4-201ENSMUST00000194541 2234 ntBASIC16.67■□□□□ 0.26
Trav6-7-dv9A0A075B639 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trav6-7-dv9A0A075B639 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav6-7-dv9A0A075B639 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav6-7-dv9A0A075B639 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav6-7-dv9A0A075B639 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Trav6-7-dv9A0A075B639 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Trav6-7-dv9A0A075B639 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav6-7-dv9A0A075B639 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Trav6-7-dv9A0A075B639 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav6-7-dv9A0A075B639 Gm6627-201ENSMUST00000218299 2386 ntBASIC16.66■□□□□ 0.26
Trav6-7-dv9A0A075B639 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav6-7-dv9A0A075B639 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav6-7-dv9A0A075B639 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav6-7-dv9A0A075B639 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav6-7-dv9A0A075B639 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav6-7-dv9A0A075B639 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Trav6-7-dv9A0A075B639 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trav6-7-dv9A0A075B639 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav6-7-dv9A0A075B639 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Trav6-7-dv9A0A075B639 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC16.66■□□□□ 0.26
Trav6-7-dv9A0A075B639 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trav6-7-dv9A0A075B639 Gm27032-201ENSMUST00000183124 1116 ntBASIC16.66■□□□□ 0.26
Trav6-7-dv9A0A075B639 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav6-7-dv9A0A075B639 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trav6-7-dv9A0A075B639 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav6-7-dv9A0A075B639 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav6-7-dv9A0A075B639 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav6-7-dv9A0A075B639 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav6-7-dv9A0A075B639 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav6-7-dv9A0A075B639 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav6-7-dv9A0A075B639 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav6-7-dv9A0A075B639 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav6-7-dv9A0A075B639 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trav6-7-dv9A0A075B639 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav6-7-dv9A0A075B639 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav6-7-dv9A0A075B639 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Trav6-7-dv9A0A075B639 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC16.65■□□□□ 0.26
Trav6-7-dv9A0A075B639 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav6-7-dv9A0A075B639 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav6-7-dv9A0A075B639 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trav6-7-dv9A0A075B639 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav6-7-dv9A0A075B639 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trav6-7-dv9A0A075B639 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trav6-7-dv9A0A075B639 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC16.65■□□□□ 0.26
Trav6-7-dv9A0A075B639 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC16.65■□□□□ 0.26
Trav6-7-dv9A0A075B639 Gm9885-202ENSMUST00000186234 2209 ntBASIC16.65■□□□□ 0.26
Trav6-7-dv9A0A075B639 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC16.65■□□□□ 0.26
Trav6-7-dv9A0A075B639 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms