Protein–RNA interactions for Protein: A0A075B625

Trav4d-3, T cell receptor alpha variable 4D-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4d-3A0A075B625 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav4d-3A0A075B625 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
Trav4d-3A0A075B625 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Trav4d-3A0A075B625 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Trav4d-3A0A075B625 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav4d-3A0A075B625 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav4d-3A0A075B625 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Trav4d-3A0A075B625 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Trav4d-3A0A075B625 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC12.84□□□□□ -0.35
Trav4d-3A0A075B625 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav4d-3A0A075B625 Gm11687-201ENSMUST00000118911 886 ntBASIC12.84□□□□□ -0.35
Trav4d-3A0A075B625 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav4d-3A0A075B625 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav4d-3A0A075B625 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav4d-3A0A075B625 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav4d-3A0A075B625 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav4d-3A0A075B625 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav4d-3A0A075B625 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Trav4d-3A0A075B625 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav4d-3A0A075B625 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Trav4d-3A0A075B625 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav4d-3A0A075B625 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav4d-3A0A075B625 AA386476-201ENSMUST00000098781 1665 ntBASIC12.83□□□□□ -0.35
Trav4d-3A0A075B625 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav4d-3A0A075B625 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav4d-3A0A075B625 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav4d-3A0A075B625 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav4d-3A0A075B625 Gm7143-201ENSMUST00000222811 859 ntBASIC12.83□□□□□ -0.36
Trav4d-3A0A075B625 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav4d-3A0A075B625 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav4d-3A0A075B625 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav4d-3A0A075B625 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav4d-3A0A075B625 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav4d-3A0A075B625 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav4d-3A0A075B625 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav4d-3A0A075B625 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav4d-3A0A075B625 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav4d-3A0A075B625 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav4d-3A0A075B625 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav4d-3A0A075B625 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Trav4d-3A0A075B625 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav4d-3A0A075B625 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Trav4d-3A0A075B625 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav4d-3A0A075B625 Gm43592-201ENSMUST00000196922 1165 ntBASIC12.82□□□□□ -0.36
Trav4d-3A0A075B625 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav4d-3A0A075B625 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Trav4d-3A0A075B625 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Trav4d-3A0A075B625 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav4d-3A0A075B625 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav4d-3A0A075B625 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav4d-3A0A075B625 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav4d-3A0A075B625 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav4d-3A0A075B625 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav4d-3A0A075B625 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Trav4d-3A0A075B625 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Trav4d-3A0A075B625 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav4d-3A0A075B625 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav4d-3A0A075B625 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav4d-3A0A075B625 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav4d-3A0A075B625 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC12.81□□□□□ -0.36
Trav4d-3A0A075B625 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav4d-3A0A075B625 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Trav4d-3A0A075B625 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav4d-3A0A075B625 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav4d-3A0A075B625 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC12.81□□□□□ -0.36
Trav4d-3A0A075B625 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav4d-3A0A075B625 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC12.81□□□□□ -0.36
Trav4d-3A0A075B625 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav4d-3A0A075B625 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav4d-3A0A075B625 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav4d-3A0A075B625 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC12.81□□□□□ -0.36
Trav4d-3A0A075B625 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Trav4d-3A0A075B625 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav4d-3A0A075B625 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav4d-3A0A075B625 Gm10620-201ENSMUST00000098379 1332 ntBASIC12.81□□□□□ -0.36
Trav4d-3A0A075B625 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Trav4d-3A0A075B625 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav4d-3A0A075B625 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav4d-3A0A075B625 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav4d-3A0A075B625 Gm10571-201ENSMUST00000097869 1638 ntBASIC12.8□□□□□ -0.36
Trav4d-3A0A075B625 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav4d-3A0A075B625 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav4d-3A0A075B625 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav4d-3A0A075B625 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC12.8□□□□□ -0.36
Trav4d-3A0A075B625 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav4d-3A0A075B625 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav4d-3A0A075B625 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav4d-3A0A075B625 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav4d-3A0A075B625 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav4d-3A0A075B625 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav4d-3A0A075B625 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC12.8□□□□□ -0.36
Trav4d-3A0A075B625 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav4d-3A0A075B625 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav4d-3A0A075B625 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav4d-3A0A075B625 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC12.8□□□□□ -0.36
Trav4d-3A0A075B625 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Trav4d-3A0A075B625 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav4d-3A0A075B625 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav4d-3A0A075B625 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav4d-3A0A075B625 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms