Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
H2afb3S4R1G7 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
H2afb3S4R1G7 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
H2afb3S4R1G7 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
H2afb3S4R1G7 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
H2afb3S4R1G7 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
H2afb3S4R1G7 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
H2afb3S4R1G7 Gm37352-201ENSMUST00000193908 2181 ntBASIC16.94■□□□□ 0.3
H2afb3S4R1G7 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
H2afb3S4R1G7 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
H2afb3S4R1G7 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
H2afb3S4R1G7 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC16.94■□□□□ 0.3
H2afb3S4R1G7 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
H2afb3S4R1G7 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC16.94■□□□□ 0.3
H2afb3S4R1G7 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
H2afb3S4R1G7 Gm18688-201ENSMUST00000204695 1859 ntBASIC16.94■□□□□ 0.3
H2afb3S4R1G7 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
H2afb3S4R1G7 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
H2afb3S4R1G7 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
H2afb3S4R1G7 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
H2afb3S4R1G7 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC16.93■□□□□ 0.3
H2afb3S4R1G7 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
H2afb3S4R1G7 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
H2afb3S4R1G7 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
H2afb3S4R1G7 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
H2afb3S4R1G7 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
H2afb3S4R1G7 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC16.93■□□□□ 0.3
H2afb3S4R1G7 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
H2afb3S4R1G7 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC16.93■□□□□ 0.3
H2afb3S4R1G7 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
H2afb3S4R1G7 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
H2afb3S4R1G7 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
H2afb3S4R1G7 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
H2afb3S4R1G7 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
H2afb3S4R1G7 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
H2afb3S4R1G7 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
H2afb3S4R1G7 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC16.93■□□□□ 0.3
H2afb3S4R1G7 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
H2afb3S4R1G7 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
H2afb3S4R1G7 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
H2afb3S4R1G7 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
H2afb3S4R1G7 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
H2afb3S4R1G7 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
H2afb3S4R1G7 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
H2afb3S4R1G7 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
H2afb3S4R1G7 Gm43231-201ENSMUST00000202960 2258 ntBASIC16.92■□□□□ 0.3
H2afb3S4R1G7 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
H2afb3S4R1G7 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
H2afb3S4R1G7 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
H2afb3S4R1G7 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
H2afb3S4R1G7 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
H2afb3S4R1G7 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
H2afb3S4R1G7 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
H2afb3S4R1G7 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
H2afb3S4R1G7 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
H2afb3S4R1G7 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
H2afb3S4R1G7 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC16.91■□□□□ 0.3
H2afb3S4R1G7 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
H2afb3S4R1G7 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
H2afb3S4R1G7 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
H2afb3S4R1G7 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
H2afb3S4R1G7 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
H2afb3S4R1G7 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
H2afb3S4R1G7 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
H2afb3S4R1G7 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
H2afb3S4R1G7 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
H2afb3S4R1G7 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
H2afb3S4R1G7 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
H2afb3S4R1G7 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
H2afb3S4R1G7 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
H2afb3S4R1G7 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
H2afb3S4R1G7 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
H2afb3S4R1G7 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
H2afb3S4R1G7 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
H2afb3S4R1G7 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
H2afb3S4R1G7 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
H2afb3S4R1G7 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
H2afb3S4R1G7 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
H2afb3S4R1G7 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
H2afb3S4R1G7 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
H2afb3S4R1G7 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
H2afb3S4R1G7 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
H2afb3S4R1G7 Gm43034-201ENSMUST00000198678 1364 ntBASIC16.89■□□□□ 0.3
H2afb3S4R1G7 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
H2afb3S4R1G7 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.3
H2afb3S4R1G7 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
H2afb3S4R1G7 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
H2afb3S4R1G7 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
H2afb3S4R1G7 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC16.89■□□□□ 0.29
H2afb3S4R1G7 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
H2afb3S4R1G7 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
H2afb3S4R1G7 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
H2afb3S4R1G7 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
H2afb3S4R1G7 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
H2afb3S4R1G7 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
H2afb3S4R1G7 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
H2afb3S4R1G7 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
H2afb3S4R1G7 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC16.89■□□□□ 0.29
H2afb3S4R1G7 Gm38342-201ENSMUST00000195710 2980 ntBASIC16.89■□□□□ 0.29
H2afb3S4R1G7 AC137127.1-201ENSMUST00000213466 1078 ntBASIC16.89■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms