Protein–RNA interactions for Protein: Q9Z0S4

Cldn13, Claudin-13, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn13Q9Z0S4 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cldn13Q9Z0S4 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Cldn13Q9Z0S4 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cldn13Q9Z0S4 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cldn13Q9Z0S4 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cldn13Q9Z0S4 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cldn13Q9Z0S4 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cldn13Q9Z0S4 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Cldn13Q9Z0S4 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cldn13Q9Z0S4 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Cldn13Q9Z0S4 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Cldn13Q9Z0S4 Gm32699-201ENSMUST00000221728 1988 ntBASIC16.81■□□□□ 0.28
Cldn13Q9Z0S4 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Cldn13Q9Z0S4 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
Cldn13Q9Z0S4 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC16.81■□□□□ 0.28
Cldn13Q9Z0S4 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Cldn13Q9Z0S4 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Cldn13Q9Z0S4 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cldn13Q9Z0S4 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cldn13Q9Z0S4 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cldn13Q9Z0S4 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cldn13Q9Z0S4 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cldn13Q9Z0S4 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cldn13Q9Z0S4 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cldn13Q9Z0S4 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cldn13Q9Z0S4 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cldn13Q9Z0S4 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cldn13Q9Z0S4 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cldn13Q9Z0S4 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cldn13Q9Z0S4 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cldn13Q9Z0S4 Gm14281-201ENSMUST00000121700 1294 ntBASIC16.79■□□□□ 0.28
Cldn13Q9Z0S4 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC16.79■□□□□ 0.28
Cldn13Q9Z0S4 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Cldn13Q9Z0S4 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cldn13Q9Z0S4 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Cldn13Q9Z0S4 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Cldn13Q9Z0S4 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
Cldn13Q9Z0S4 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Cldn13Q9Z0S4 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
Cldn13Q9Z0S4 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cldn13Q9Z0S4 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cldn13Q9Z0S4 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Cldn13Q9Z0S4 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC16.78■□□□□ 0.28
Cldn13Q9Z0S4 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Cldn13Q9Z0S4 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cldn13Q9Z0S4 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cldn13Q9Z0S4 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cldn13Q9Z0S4 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Cldn13Q9Z0S4 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Cldn13Q9Z0S4 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cldn13Q9Z0S4 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cldn13Q9Z0S4 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cldn13Q9Z0S4 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cldn13Q9Z0S4 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cldn13Q9Z0S4 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cldn13Q9Z0S4 Rncr4-201ENSMUST00000194541 2234 ntBASIC16.77■□□□□ 0.28
Cldn13Q9Z0S4 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
Cldn13Q9Z0S4 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Cldn13Q9Z0S4 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Cldn13Q9Z0S4 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cldn13Q9Z0S4 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC16.77■□□□□ 0.28
Cldn13Q9Z0S4 Gm42642-201ENSMUST00000200683 355 ntBASIC16.77■□□□□ 0.28
Cldn13Q9Z0S4 Gm9988-201ENSMUST00000069786 435 ntBASIC16.77■□□□□ 0.28
Cldn13Q9Z0S4 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cldn13Q9Z0S4 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cldn13Q9Z0S4 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Cldn13Q9Z0S4 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
Cldn13Q9Z0S4 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cldn13Q9Z0S4 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Cldn13Q9Z0S4 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Cldn13Q9Z0S4 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cldn13Q9Z0S4 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cldn13Q9Z0S4 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cldn13Q9Z0S4 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Cldn13Q9Z0S4 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC16.76■□□□□ 0.27
Cldn13Q9Z0S4 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Cldn13Q9Z0S4 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cldn13Q9Z0S4 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Cldn13Q9Z0S4 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cldn13Q9Z0S4 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Cldn13Q9Z0S4 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Cldn13Q9Z0S4 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Cldn13Q9Z0S4 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Cldn13Q9Z0S4 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cldn13Q9Z0S4 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cldn13Q9Z0S4 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cldn13Q9Z0S4 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cldn13Q9Z0S4 Gm6627-201ENSMUST00000218299 2386 ntBASIC16.75■□□□□ 0.27
Cldn13Q9Z0S4 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cldn13Q9Z0S4 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cldn13Q9Z0S4 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC16.75■□□□□ 0.27
Cldn13Q9Z0S4 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC16.75■□□□□ 0.27
Cldn13Q9Z0S4 Gm26571-201ENSMUST00000181399 666 ntBASIC16.75■□□□□ 0.27
Cldn13Q9Z0S4 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC16.75■□□□□ 0.27
Cldn13Q9Z0S4 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cldn13Q9Z0S4 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC16.75■□□□□ 0.27
Cldn13Q9Z0S4 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Cldn13Q9Z0S4 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Cldn13Q9Z0S4 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cldn13Q9Z0S4 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 12 ms