Protein–RNA interactions for Protein: Q9R0A1

Clcn2, Chloride channel protein 2, mousemouse

Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn2Q9R0A1 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Clcn2Q9R0A1 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Clcn2Q9R0A1 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Clcn2Q9R0A1 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC19.29■□□□□ 0.68
Clcn2Q9R0A1 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Clcn2Q9R0A1 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Clcn2Q9R0A1 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Clcn2Q9R0A1 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC19.28■□□□□ 0.68
Clcn2Q9R0A1 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Clcn2Q9R0A1 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Clcn2Q9R0A1 Gm43182-201ENSMUST00000199476 2528 ntBASIC19.28■□□□□ 0.68
Clcn2Q9R0A1 Gm32699-201ENSMUST00000221728 1988 ntBASIC19.28■□□□□ 0.68
Clcn2Q9R0A1 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Clcn2Q9R0A1 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Clcn2Q9R0A1 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC19.28■□□□□ 0.68
Clcn2Q9R0A1 AC154266.1-201ENSMUST00000223190 503 ntBASIC19.28■□□□□ 0.68
Clcn2Q9R0A1 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Clcn2Q9R0A1 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Clcn2Q9R0A1 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Clcn2Q9R0A1 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Clcn2Q9R0A1 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Clcn2Q9R0A1 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Clcn2Q9R0A1 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.27■□□□□ 0.68
Clcn2Q9R0A1 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Clcn2Q9R0A1 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
Clcn2Q9R0A1 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Clcn2Q9R0A1 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC19.27■□□□□ 0.68
Clcn2Q9R0A1 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Clcn2Q9R0A1 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Clcn2Q9R0A1 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Clcn2Q9R0A1 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Clcn2Q9R0A1 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Clcn2Q9R0A1 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Clcn2Q9R0A1 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Clcn2Q9R0A1 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Clcn2Q9R0A1 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Clcn2Q9R0A1 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Clcn2Q9R0A1 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC19.26■□□□□ 0.67
Clcn2Q9R0A1 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC19.26■□□□□ 0.67
Clcn2Q9R0A1 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC19.26■□□□□ 0.67
Clcn2Q9R0A1 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Clcn2Q9R0A1 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC19.26■□□□□ 0.67
Clcn2Q9R0A1 Grk6-206ENSMUST00000224995 2971 ntBASIC19.26■□□□□ 0.67
Clcn2Q9R0A1 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Clcn2Q9R0A1 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Clcn2Q9R0A1 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Clcn2Q9R0A1 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Clcn2Q9R0A1 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
Clcn2Q9R0A1 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Clcn2Q9R0A1 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Clcn2Q9R0A1 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Clcn2Q9R0A1 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Clcn2Q9R0A1 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Clcn2Q9R0A1 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Clcn2Q9R0A1 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Clcn2Q9R0A1 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Clcn2Q9R0A1 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Clcn2Q9R0A1 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Clcn2Q9R0A1 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Clcn2Q9R0A1 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Clcn2Q9R0A1 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Clcn2Q9R0A1 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Clcn2Q9R0A1 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Clcn2Q9R0A1 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Clcn2Q9R0A1 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Clcn2Q9R0A1 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Clcn2Q9R0A1 Gm26833-201ENSMUST00000180899 440 ntBASIC19.24■□□□□ 0.67
Clcn2Q9R0A1 Cdc34b-202ENSMUST00000188741 1252 ntBASIC19.24■□□□□ 0.67
Clcn2Q9R0A1 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Clcn2Q9R0A1 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Clcn2Q9R0A1 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Clcn2Q9R0A1 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Clcn2Q9R0A1 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Clcn2Q9R0A1 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Clcn2Q9R0A1 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC19.24■□□□□ 0.67
Clcn2Q9R0A1 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Clcn2Q9R0A1 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Clcn2Q9R0A1 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Clcn2Q9R0A1 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC19.24■□□□□ 0.67
Clcn2Q9R0A1 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Clcn2Q9R0A1 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Clcn2Q9R0A1 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Clcn2Q9R0A1 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Clcn2Q9R0A1 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Clcn2Q9R0A1 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC19.23■□□□□ 0.67
Clcn2Q9R0A1 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Clcn2Q9R0A1 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Clcn2Q9R0A1 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Clcn2Q9R0A1 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Clcn2Q9R0A1 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Clcn2Q9R0A1 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Clcn2Q9R0A1 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Clcn2Q9R0A1 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Clcn2Q9R0A1 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Clcn2Q9R0A1 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Clcn2Q9R0A1 Dmtn-210ENSMUST00000228824 2377 ntBASIC19.22■□□□□ 0.67
Clcn2Q9R0A1 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Clcn2Q9R0A1 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Clcn2Q9R0A1 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC19.22■□□□□ 0.67
Clcn2Q9R0A1 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 85.7 ms