Protein–RNA interactions for Protein: Q9R061

Nubp2, Cytosolic Fe-S cluster assembly factor NUBP2, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp2Q9R061 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Nubp2Q9R061 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nubp2Q9R061 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nubp2Q9R061 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC16.67■□□□□ 0.26
Nubp2Q9R061 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC16.67■□□□□ 0.26
Nubp2Q9R061 AC099934.2-201ENSMUST00000196389 70 ntBASIC16.67■□□□□ 0.26
Nubp2Q9R061 AC156953.1-201ENSMUST00000196953 70 ntBASIC16.67■□□□□ 0.26
Nubp2Q9R061 AC157822.2-201ENSMUST00000200291 70 ntBASIC16.67■□□□□ 0.26
Nubp2Q9R061 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Nubp2Q9R061 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nubp2Q9R061 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Nubp2Q9R061 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nubp2Q9R061 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nubp2Q9R061 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nubp2Q9R061 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nubp2Q9R061 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nubp2Q9R061 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC16.67■□□□□ 0.26
Nubp2Q9R061 Gm5784-201ENSMUST00000179344 2478 ntBASIC16.67■□□□□ 0.26
Nubp2Q9R061 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nubp2Q9R061 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nubp2Q9R061 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nubp2Q9R061 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Nubp2Q9R061 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nubp2Q9R061 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Nubp2Q9R061 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Nubp2Q9R061 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nubp2Q9R061 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Nubp2Q9R061 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Nubp2Q9R061 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Nubp2Q9R061 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nubp2Q9R061 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nubp2Q9R061 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Nubp2Q9R061 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nubp2Q9R061 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nubp2Q9R061 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Nubp2Q9R061 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nubp2Q9R061 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nubp2Q9R061 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Nubp2Q9R061 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nubp2Q9R061 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC16.65■□□□□ 0.26
Nubp2Q9R061 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nubp2Q9R061 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC16.65■□□□□ 0.26
Nubp2Q9R061 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC16.65■□□□□ 0.26
Nubp2Q9R061 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nubp2Q9R061 Gm42642-201ENSMUST00000200683 355 ntBASIC16.65■□□□□ 0.26
Nubp2Q9R061 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC16.65■□□□□ 0.26
Nubp2Q9R061 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nubp2Q9R061 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Nubp2Q9R061 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nubp2Q9R061 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nubp2Q9R061 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nubp2Q9R061 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Nubp2Q9R061 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nubp2Q9R061 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Nubp2Q9R061 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nubp2Q9R061 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Nubp2Q9R061 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Nubp2Q9R061 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nubp2Q9R061 AC126028.2-201ENSMUST00000228100 1833 ntBASIC16.64■□□□□ 0.25
Nubp2Q9R061 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Nubp2Q9R061 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nubp2Q9R061 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC16.64■□□□□ 0.25
Nubp2Q9R061 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC16.64■□□□□ 0.25
Nubp2Q9R061 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nubp2Q9R061 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC16.64■□□□□ 0.25
Nubp2Q9R061 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nubp2Q9R061 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Nubp2Q9R061 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Nubp2Q9R061 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC16.64■□□□□ 0.25
Nubp2Q9R061 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Nubp2Q9R061 Gm20100-201ENSMUST00000209418 2272 ntBASIC16.63■□□□□ 0.25
Nubp2Q9R061 Gm10571-201ENSMUST00000097869 1638 ntBASIC16.63■□□□□ 0.25
Nubp2Q9R061 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
Nubp2Q9R061 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Nubp2Q9R061 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nubp2Q9R061 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Nubp2Q9R061 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nubp2Q9R061 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Nubp2Q9R061 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nubp2Q9R061 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Nubp2Q9R061 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nubp2Q9R061 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC16.62■□□□□ 0.25
Nubp2Q9R061 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nubp2Q9R061 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nubp2Q9R061 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
Nubp2Q9R061 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nubp2Q9R061 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nubp2Q9R061 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nubp2Q9R061 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nubp2Q9R061 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nubp2Q9R061 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC16.62■□□□□ 0.25
Nubp2Q9R061 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nubp2Q9R061 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nubp2Q9R061 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC16.62■□□□□ 0.25
Nubp2Q9R061 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nubp2Q9R061 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nubp2Q9R061 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Nubp2Q9R061 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC16.61■□□□□ 0.25
Nubp2Q9R061 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nubp2Q9R061 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms