Protein–RNA interactions for Protein: Q9JJ43

Rbfox1, RNA binding protein fox-1 homolog 1, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbfox1Q9JJ43 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rbfox1Q9JJ43 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rbfox1Q9JJ43 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rbfox1Q9JJ43 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC16.04■□□□□ 0.16
Rbfox1Q9JJ43 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Rbfox1Q9JJ43 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rbfox1Q9JJ43 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rbfox1Q9JJ43 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rbfox1Q9JJ43 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rbfox1Q9JJ43 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Rbfox1Q9JJ43 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Rbfox1Q9JJ43 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rbfox1Q9JJ43 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Rbfox1Q9JJ43 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rbfox1Q9JJ43 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Rbfox1Q9JJ43 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rbfox1Q9JJ43 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Rbfox1Q9JJ43 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rbfox1Q9JJ43 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Rbfox1Q9JJ43 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rbfox1Q9JJ43 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC16.03■□□□□ 0.16
Rbfox1Q9JJ43 Gm43137-201ENSMUST00000198052 594 ntBASIC16.03■□□□□ 0.16
Rbfox1Q9JJ43 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rbfox1Q9JJ43 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rbfox1Q9JJ43 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rbfox1Q9JJ43 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rbfox1Q9JJ43 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Rbfox1Q9JJ43 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Rbfox1Q9JJ43 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC16.03■□□□□ 0.16
Rbfox1Q9JJ43 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rbfox1Q9JJ43 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC16.02■□□□□ 0.16
Rbfox1Q9JJ43 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rbfox1Q9JJ43 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Rbfox1Q9JJ43 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Rbfox1Q9JJ43 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rbfox1Q9JJ43 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC16.02■□□□□ 0.16
Rbfox1Q9JJ43 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rbfox1Q9JJ43 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Rbfox1Q9JJ43 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Rbfox1Q9JJ43 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC16.02■□□□□ 0.16
Rbfox1Q9JJ43 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Rbfox1Q9JJ43 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rbfox1Q9JJ43 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC16.02■□□□□ 0.16
Rbfox1Q9JJ43 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC16.02■□□□□ 0.15
Rbfox1Q9JJ43 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Rbfox1Q9JJ43 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Rbfox1Q9JJ43 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Rbfox1Q9JJ43 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Rbfox1Q9JJ43 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Rbfox1Q9JJ43 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Rbfox1Q9JJ43 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Rbfox1Q9JJ43 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rbfox1Q9JJ43 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rbfox1Q9JJ43 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC16.01■□□□□ 0.15
Rbfox1Q9JJ43 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Rbfox1Q9JJ43 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rbfox1Q9JJ43 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rbfox1Q9JJ43 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rbfox1Q9JJ43 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rbfox1Q9JJ43 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rbfox1Q9JJ43 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rbfox1Q9JJ43 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rbfox1Q9JJ43 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Rbfox1Q9JJ43 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC16.01■□□□□ 0.15
Rbfox1Q9JJ43 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Rbfox1Q9JJ43 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rbfox1Q9JJ43 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rbfox1Q9JJ43 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rbfox1Q9JJ43 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Rbfox1Q9JJ43 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Rbfox1Q9JJ43 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rbfox1Q9JJ43 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Rbfox1Q9JJ43 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Rbfox1Q9JJ43 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Rbfox1Q9JJ43 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Rbfox1Q9JJ43 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Rbfox1Q9JJ43 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC16■□□□□ 0.15
Rbfox1Q9JJ43 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Rbfox1Q9JJ43 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Rbfox1Q9JJ43 Fam105a-203ENSMUST00000226170 3043 ntBASIC16■□□□□ 0.15
Rbfox1Q9JJ43 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Rbfox1Q9JJ43 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Rbfox1Q9JJ43 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Rbfox1Q9JJ43 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Rbfox1Q9JJ43 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Rbfox1Q9JJ43 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC16■□□□□ 0.15
Rbfox1Q9JJ43 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC16■□□□□ 0.15
Rbfox1Q9JJ43 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Rbfox1Q9JJ43 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Rbfox1Q9JJ43 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Rbfox1Q9JJ43 AC165080.2-201ENSMUST00000217491 1530 ntBASIC15.99■□□□□ 0.15
Rbfox1Q9JJ43 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Rbfox1Q9JJ43 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC15.99■□□□□ 0.15
Rbfox1Q9JJ43 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Rbfox1Q9JJ43 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Rbfox1Q9JJ43 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Rbfox1Q9JJ43 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Rbfox1Q9JJ43 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC15.99■□□□□ 0.15
Rbfox1Q9JJ43 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC15.99■□□□□ 0.15
Rbfox1Q9JJ43 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC15.99■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms