Protein–RNA interactions for Protein: Q9JIW5

Smad9, Mothers against decapentaplegic homolog 9, mousemouse

Predictions only

Length 430 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smad9Q9JIW5 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smad9Q9JIW5 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Smad9Q9JIW5 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Smad9Q9JIW5 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.84■□□□□ 0.61
Smad9Q9JIW5 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smad9Q9JIW5 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Smad9Q9JIW5 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Smad9Q9JIW5 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Smad9Q9JIW5 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Smad9Q9JIW5 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Smad9Q9JIW5 Gm7860-201ENSMUST00000121190 879 ntBASIC18.83■□□□□ 0.6
Smad9Q9JIW5 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC18.83■□□□□ 0.6
Smad9Q9JIW5 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Smad9Q9JIW5 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
Smad9Q9JIW5 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Smad9Q9JIW5 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Smad9Q9JIW5 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC18.83■□□□□ 0.6
Smad9Q9JIW5 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC18.83■□□□□ 0.6
Smad9Q9JIW5 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Smad9Q9JIW5 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Smad9Q9JIW5 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
Smad9Q9JIW5 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smad9Q9JIW5 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Smad9Q9JIW5 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smad9Q9JIW5 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Smad9Q9JIW5 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smad9Q9JIW5 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smad9Q9JIW5 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Smad9Q9JIW5 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.82■□□□□ 0.6
Smad9Q9JIW5 Gm14281-201ENSMUST00000121700 1294 ntBASIC18.82■□□□□ 0.6
Smad9Q9JIW5 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Smad9Q9JIW5 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smad9Q9JIW5 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smad9Q9JIW5 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Smad9Q9JIW5 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smad9Q9JIW5 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smad9Q9JIW5 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smad9Q9JIW5 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smad9Q9JIW5 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Smad9Q9JIW5 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smad9Q9JIW5 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smad9Q9JIW5 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smad9Q9JIW5 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Smad9Q9JIW5 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC18.81■□□□□ 0.6
Smad9Q9JIW5 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smad9Q9JIW5 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smad9Q9JIW5 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smad9Q9JIW5 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Smad9Q9JIW5 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC18.81■□□□□ 0.6
Smad9Q9JIW5 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Smad9Q9JIW5 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smad9Q9JIW5 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smad9Q9JIW5 Gm18688-201ENSMUST00000204695 1859 ntBASIC18.81■□□□□ 0.6
Smad9Q9JIW5 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Smad9Q9JIW5 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smad9Q9JIW5 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC18.81■□□□□ 0.6
Smad9Q9JIW5 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smad9Q9JIW5 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smad9Q9JIW5 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Smad9Q9JIW5 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.8■□□□□ 0.6
Smad9Q9JIW5 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smad9Q9JIW5 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smad9Q9JIW5 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smad9Q9JIW5 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Smad9Q9JIW5 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Smad9Q9JIW5 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
Smad9Q9JIW5 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smad9Q9JIW5 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC18.8■□□□□ 0.6
Smad9Q9JIW5 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Smad9Q9JIW5 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC18.8■□□□□ 0.6
Smad9Q9JIW5 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smad9Q9JIW5 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smad9Q9JIW5 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smad9Q9JIW5 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smad9Q9JIW5 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Smad9Q9JIW5 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Smad9Q9JIW5 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Smad9Q9JIW5 Gm10129-202ENSMUST00000193100 1316 ntBASIC18.79■□□□□ 0.6
Smad9Q9JIW5 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Smad9Q9JIW5 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Smad9Q9JIW5 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smad9Q9JIW5 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Smad9Q9JIW5 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.79■□□□□ 0.6
Smad9Q9JIW5 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smad9Q9JIW5 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smad9Q9JIW5 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
Smad9Q9JIW5 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Smad9Q9JIW5 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC18.79■□□□□ 0.6
Smad9Q9JIW5 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Smad9Q9JIW5 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Smad9Q9JIW5 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smad9Q9JIW5 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smad9Q9JIW5 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smad9Q9JIW5 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smad9Q9JIW5 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Smad9Q9JIW5 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smad9Q9JIW5 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Smad9Q9JIW5 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smad9Q9JIW5 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smad9Q9JIW5 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms