Protein–RNA interactions for Protein: Q9JIG8

Praf2, PRA1 family protein 2, mousemouse

Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Praf2Q9JIG8 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Praf2Q9JIG8 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Praf2Q9JIG8 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC16.81■□□□□ 0.28
Praf2Q9JIG8 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC16.81■□□□□ 0.28
Praf2Q9JIG8 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Praf2Q9JIG8 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Praf2Q9JIG8 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Praf2Q9JIG8 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Praf2Q9JIG8 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Praf2Q9JIG8 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
Praf2Q9JIG8 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Praf2Q9JIG8 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Praf2Q9JIG8 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC16.8■□□□□ 0.28
Praf2Q9JIG8 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Praf2Q9JIG8 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Praf2Q9JIG8 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Praf2Q9JIG8 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Praf2Q9JIG8 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Praf2Q9JIG8 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Praf2Q9JIG8 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC16.8■□□□□ 0.28
Praf2Q9JIG8 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Praf2Q9JIG8 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
Praf2Q9JIG8 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Praf2Q9JIG8 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Praf2Q9JIG8 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Praf2Q9JIG8 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Praf2Q9JIG8 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Praf2Q9JIG8 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Praf2Q9JIG8 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Praf2Q9JIG8 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Praf2Q9JIG8 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC16.79■□□□□ 0.28
Praf2Q9JIG8 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC16.79■□□□□ 0.28
Praf2Q9JIG8 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Praf2Q9JIG8 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC16.79■□□□□ 0.28
Praf2Q9JIG8 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Praf2Q9JIG8 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC16.79■□□□□ 0.28
Praf2Q9JIG8 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Praf2Q9JIG8 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Praf2Q9JIG8 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Praf2Q9JIG8 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Praf2Q9JIG8 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Praf2Q9JIG8 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Praf2Q9JIG8 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Praf2Q9JIG8 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Praf2Q9JIG8 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
Praf2Q9JIG8 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Praf2Q9JIG8 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Praf2Q9JIG8 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Praf2Q9JIG8 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Praf2Q9JIG8 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Praf2Q9JIG8 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Praf2Q9JIG8 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Praf2Q9JIG8 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Praf2Q9JIG8 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Praf2Q9JIG8 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Praf2Q9JIG8 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Praf2Q9JIG8 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Praf2Q9JIG8 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Praf2Q9JIG8 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Praf2Q9JIG8 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Praf2Q9JIG8 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Praf2Q9JIG8 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
Praf2Q9JIG8 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Praf2Q9JIG8 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Praf2Q9JIG8 AC154266.1-201ENSMUST00000223190 503 ntBASIC16.77■□□□□ 0.28
Praf2Q9JIG8 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Praf2Q9JIG8 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Praf2Q9JIG8 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Praf2Q9JIG8 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Praf2Q9JIG8 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Praf2Q9JIG8 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Praf2Q9JIG8 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Praf2Q9JIG8 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Praf2Q9JIG8 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Praf2Q9JIG8 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC16.76■□□□□ 0.27
Praf2Q9JIG8 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Praf2Q9JIG8 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Praf2Q9JIG8 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Praf2Q9JIG8 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC16.76■□□□□ 0.27
Praf2Q9JIG8 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC16.76■□□□□ 0.27
Praf2Q9JIG8 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Praf2Q9JIG8 Gm32699-201ENSMUST00000221728 1988 ntBASIC16.76■□□□□ 0.27
Praf2Q9JIG8 Gm43213-201ENSMUST00000151866 1790 ntBASIC16.76■□□□□ 0.27
Praf2Q9JIG8 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Praf2Q9JIG8 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Praf2Q9JIG8 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Praf2Q9JIG8 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Praf2Q9JIG8 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Praf2Q9JIG8 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Praf2Q9JIG8 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Praf2Q9JIG8 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Praf2Q9JIG8 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Praf2Q9JIG8 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Praf2Q9JIG8 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Praf2Q9JIG8 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Praf2Q9JIG8 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Praf2Q9JIG8 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Praf2Q9JIG8 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Praf2Q9JIG8 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Praf2Q9JIG8 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms