Protein–RNA interactions for Protein: Q9EQH3

Vps35, Vacuolar protein sorting-associated protein 35, mousemouse

Known RBP Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps35Q9EQH3 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Vps35Q9EQH3 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC18.84■□□□□ 0.61
Vps35Q9EQH3 Gm42778-201ENSMUST00000199644 553 ntBASIC18.84■□□□□ 0.61
Vps35Q9EQH3 Gm42642-201ENSMUST00000200683 355 ntBASIC18.84■□□□□ 0.61
Vps35Q9EQH3 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Vps35Q9EQH3 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Vps35Q9EQH3 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Vps35Q9EQH3 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Vps35Q9EQH3 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Vps35Q9EQH3 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Vps35Q9EQH3 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Vps35Q9EQH3 Gm45640-201ENSMUST00000210665 1896 ntBASIC18.84■□□□□ 0.61
Vps35Q9EQH3 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Vps35Q9EQH3 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
Vps35Q9EQH3 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Vps35Q9EQH3 Gm7860-201ENSMUST00000121190 879 ntBASIC18.83■□□□□ 0.6
Vps35Q9EQH3 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Vps35Q9EQH3 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC18.83■□□□□ 0.6
Vps35Q9EQH3 Gm10033-202ENSMUST00000211874 928 ntBASIC18.83■□□□□ 0.6
Vps35Q9EQH3 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Vps35Q9EQH3 Golph3-205ENSMUST00000228671 2842 ntBASIC18.83■□□□□ 0.6
Vps35Q9EQH3 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Vps35Q9EQH3 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.83■□□□□ 0.6
Vps35Q9EQH3 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Vps35Q9EQH3 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Vps35Q9EQH3 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Vps35Q9EQH3 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.82■□□□□ 0.6
Vps35Q9EQH3 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Vps35Q9EQH3 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Vps35Q9EQH3 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Vps35Q9EQH3 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC18.82■□□□□ 0.6
Vps35Q9EQH3 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Vps35Q9EQH3 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Vps35Q9EQH3 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Vps35Q9EQH3 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC18.82■□□□□ 0.6
Vps35Q9EQH3 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Vps35Q9EQH3 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Vps35Q9EQH3 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Vps35Q9EQH3 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
Vps35Q9EQH3 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Vps35Q9EQH3 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Vps35Q9EQH3 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
Vps35Q9EQH3 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Vps35Q9EQH3 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Vps35Q9EQH3 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Vps35Q9EQH3 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Vps35Q9EQH3 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vps35Q9EQH3 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Vps35Q9EQH3 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Vps35Q9EQH3 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC18.81■□□□□ 0.6
Vps35Q9EQH3 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vps35Q9EQH3 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vps35Q9EQH3 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vps35Q9EQH3 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC18.81■□□□□ 0.6
Vps35Q9EQH3 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Vps35Q9EQH3 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vps35Q9EQH3 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Vps35Q9EQH3 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vps35Q9EQH3 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.81■□□□□ 0.6
Vps35Q9EQH3 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vps35Q9EQH3 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vps35Q9EQH3 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vps35Q9EQH3 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Vps35Q9EQH3 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vps35Q9EQH3 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vps35Q9EQH3 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vps35Q9EQH3 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vps35Q9EQH3 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vps35Q9EQH3 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
Vps35Q9EQH3 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC18.8■□□□□ 0.6
Vps35Q9EQH3 Gm38205-201ENSMUST00000192243 258 ntBASIC18.8■□□□□ 0.6
Vps35Q9EQH3 Gm18671-201ENSMUST00000214826 683 ntBASIC18.8■□□□□ 0.6
Vps35Q9EQH3 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vps35Q9EQH3 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vps35Q9EQH3 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vps35Q9EQH3 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Vps35Q9EQH3 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vps35Q9EQH3 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vps35Q9EQH3 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vps35Q9EQH3 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.8■□□□□ 0.6
Vps35Q9EQH3 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vps35Q9EQH3 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vps35Q9EQH3 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vps35Q9EQH3 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Vps35Q9EQH3 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Vps35Q9EQH3 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
Vps35Q9EQH3 Gm10849-201ENSMUST00000100397 618 ntBASIC18.79■□□□□ 0.6
Vps35Q9EQH3 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Vps35Q9EQH3 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC18.79■□□□□ 0.6
Vps35Q9EQH3 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC18.79■□□□□ 0.6
Vps35Q9EQH3 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.79■□□□□ 0.6
Vps35Q9EQH3 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Vps35Q9EQH3 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Vps35Q9EQH3 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Vps35Q9EQH3 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.79■□□□□ 0.6
Vps35Q9EQH3 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.78■□□□□ 0.6
Vps35Q9EQH3 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Vps35Q9EQH3 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Vps35Q9EQH3 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
Vps35Q9EQH3 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms