Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Cdc40Q9DC48 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cdc40Q9DC48 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Cdc40Q9DC48 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Cdc40Q9DC48 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Cdc40Q9DC48 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cdc40Q9DC48 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cdc40Q9DC48 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cdc40Q9DC48 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Cdc40Q9DC48 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Cdc40Q9DC48 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cdc40Q9DC48 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Cdc40Q9DC48 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Cdc40Q9DC48 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cdc40Q9DC48 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Cdc40Q9DC48 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cdc40Q9DC48 Gm13234-201ENSMUST00000120010 747 ntBASIC17.49■□□□□ 0.39
Cdc40Q9DC48 Gm14281-201ENSMUST00000121700 1294 ntBASIC17.49■□□□□ 0.39
Cdc40Q9DC48 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Cdc40Q9DC48 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC17.49■□□□□ 0.39
Cdc40Q9DC48 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Cdc40Q9DC48 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cdc40Q9DC48 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cdc40Q9DC48 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cdc40Q9DC48 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Cdc40Q9DC48 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cdc40Q9DC48 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Cdc40Q9DC48 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cdc40Q9DC48 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cdc40Q9DC48 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC17.48■□□□□ 0.39
Cdc40Q9DC48 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC17.48■□□□□ 0.39
Cdc40Q9DC48 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC17.48■□□□□ 0.39
Cdc40Q9DC48 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC17.48■□□□□ 0.39
Cdc40Q9DC48 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cdc40Q9DC48 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Cdc40Q9DC48 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
Cdc40Q9DC48 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cdc40Q9DC48 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.48■□□□□ 0.39
Cdc40Q9DC48 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Cdc40Q9DC48 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cdc40Q9DC48 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cdc40Q9DC48 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC17.47■□□□□ 0.39
Cdc40Q9DC48 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Cdc40Q9DC48 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC17.47■□□□□ 0.39
Cdc40Q9DC48 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cdc40Q9DC48 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC17.47■□□□□ 0.39
Cdc40Q9DC48 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC17.47■□□□□ 0.39
Cdc40Q9DC48 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cdc40Q9DC48 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cdc40Q9DC48 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cdc40Q9DC48 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Cdc40Q9DC48 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Cdc40Q9DC48 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Cdc40Q9DC48 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cdc40Q9DC48 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Cdc40Q9DC48 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cdc40Q9DC48 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cdc40Q9DC48 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cdc40Q9DC48 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Cdc40Q9DC48 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Cdc40Q9DC48 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC17.46■□□□□ 0.39
Cdc40Q9DC48 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Cdc40Q9DC48 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Cdc40Q9DC48 Gm10602-201ENSMUST00000098239 609 ntBASIC17.46■□□□□ 0.39
Cdc40Q9DC48 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cdc40Q9DC48 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cdc40Q9DC48 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cdc40Q9DC48 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cdc40Q9DC48 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Cdc40Q9DC48 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Cdc40Q9DC48 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cdc40Q9DC48 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Cdc40Q9DC48 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cdc40Q9DC48 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Cdc40Q9DC48 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC17.45■□□□□ 0.38
Cdc40Q9DC48 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cdc40Q9DC48 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cdc40Q9DC48 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Cdc40Q9DC48 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cdc40Q9DC48 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cdc40Q9DC48 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Cdc40Q9DC48 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cdc40Q9DC48 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cdc40Q9DC48 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cdc40Q9DC48 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Cdc40Q9DC48 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC17.44■□□□□ 0.38
Cdc40Q9DC48 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cdc40Q9DC48 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC17.44■□□□□ 0.38
Cdc40Q9DC48 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cdc40Q9DC48 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Cdc40Q9DC48 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC17.44■□□□□ 0.38
Cdc40Q9DC48 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cdc40Q9DC48 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cdc40Q9DC48 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cdc40Q9DC48 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Cdc40Q9DC48 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cdc40Q9DC48 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Cdc40Q9DC48 AC112142.1-201ENSMUST00000228796 918 ntBASIC17.43■□□□□ 0.38
Cdc40Q9DC48 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cdc40Q9DC48 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms