Protein–RNA interactions for Protein: Q9DC33

Hmg20a, High mobility group protein 20A, mousemouse

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmg20aQ9DC33 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Hmg20aQ9DC33 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC17.27■□□□□ 0.36
Hmg20aQ9DC33 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hmg20aQ9DC33 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hmg20aQ9DC33 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC17.27■□□□□ 0.36
Hmg20aQ9DC33 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Hmg20aQ9DC33 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Hmg20aQ9DC33 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Hmg20aQ9DC33 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Hmg20aQ9DC33 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Hmg20aQ9DC33 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
Hmg20aQ9DC33 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hmg20aQ9DC33 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC17.26■□□□□ 0.35
Hmg20aQ9DC33 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Hmg20aQ9DC33 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hmg20aQ9DC33 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Hmg20aQ9DC33 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Hmg20aQ9DC33 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC17.26■□□□□ 0.35
Hmg20aQ9DC33 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Hmg20aQ9DC33 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hmg20aQ9DC33 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Hmg20aQ9DC33 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hmg20aQ9DC33 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hmg20aQ9DC33 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hmg20aQ9DC33 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Hmg20aQ9DC33 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hmg20aQ9DC33 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC17.25■□□□□ 0.35
Hmg20aQ9DC33 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Hmg20aQ9DC33 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC17.25■□□□□ 0.35
Hmg20aQ9DC33 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hmg20aQ9DC33 AC123834.2-201ENSMUST00000224038 2340 ntBASIC17.25■□□□□ 0.35
Hmg20aQ9DC33 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hmg20aQ9DC33 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hmg20aQ9DC33 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Hmg20aQ9DC33 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Hmg20aQ9DC33 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Hmg20aQ9DC33 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hmg20aQ9DC33 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Hmg20aQ9DC33 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hmg20aQ9DC33 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hmg20aQ9DC33 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hmg20aQ9DC33 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hmg20aQ9DC33 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Hmg20aQ9DC33 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hmg20aQ9DC33 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hmg20aQ9DC33 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hmg20aQ9DC33 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hmg20aQ9DC33 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hmg20aQ9DC33 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hmg20aQ9DC33 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hmg20aQ9DC33 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hmg20aQ9DC33 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Hmg20aQ9DC33 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hmg20aQ9DC33 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
Hmg20aQ9DC33 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hmg20aQ9DC33 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Hmg20aQ9DC33 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Hmg20aQ9DC33 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Hmg20aQ9DC33 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Hmg20aQ9DC33 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hmg20aQ9DC33 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Hmg20aQ9DC33 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Hmg20aQ9DC33 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hmg20aQ9DC33 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.22■□□□□ 0.35
Hmg20aQ9DC33 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hmg20aQ9DC33 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
Hmg20aQ9DC33 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC17.22■□□□□ 0.35
Hmg20aQ9DC33 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.22■□□□□ 0.35
Hmg20aQ9DC33 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hmg20aQ9DC33 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hmg20aQ9DC33 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hmg20aQ9DC33 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hmg20aQ9DC33 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hmg20aQ9DC33 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hmg20aQ9DC33 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hmg20aQ9DC33 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Hmg20aQ9DC33 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC17.21■□□□□ 0.35
Hmg20aQ9DC33 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Hmg20aQ9DC33 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hmg20aQ9DC33 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hmg20aQ9DC33 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hmg20aQ9DC33 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.21■□□□□ 0.35
Hmg20aQ9DC33 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hmg20aQ9DC33 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hmg20aQ9DC33 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Hmg20aQ9DC33 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hmg20aQ9DC33 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC17.21■□□□□ 0.35
Hmg20aQ9DC33 Nsd1-203ENSMUST00000224156 1149 ntBASIC17.21■□□□□ 0.35
Hmg20aQ9DC33 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hmg20aQ9DC33 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Hmg20aQ9DC33 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hmg20aQ9DC33 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Hmg20aQ9DC33 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Hmg20aQ9DC33 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC17.2■□□□□ 0.34
Hmg20aQ9DC33 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Hmg20aQ9DC33 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hmg20aQ9DC33 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Hmg20aQ9DC33 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hmg20aQ9DC33 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hmg20aQ9DC33 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms