Protein–RNA interactions for Protein: Q9DA21

Smco2, Single-pass membrane and coiled-coil domain-containing protein 2, mousemouse

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco2Q9DA21 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC21.23■□□□□ 0.99
Smco2Q9DA21 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Smco2Q9DA21 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Smco2Q9DA21 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Smco2Q9DA21 Mir5133-201ENSMUST00000174955 77 ntBASIC21.23■□□□□ 0.99
Smco2Q9DA21 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Smco2Q9DA21 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Smco2Q9DA21 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Smco2Q9DA21 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Smco2Q9DA21 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Smco2Q9DA21 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC21.22■□□□□ 0.99
Smco2Q9DA21 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Smco2Q9DA21 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Smco2Q9DA21 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Smco2Q9DA21 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Smco2Q9DA21 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Smco2Q9DA21 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Smco2Q9DA21 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Smco2Q9DA21 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Smco2Q9DA21 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC21.22■□□□□ 0.99
Smco2Q9DA21 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Smco2Q9DA21 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC21.22■□□□□ 0.99
Smco2Q9DA21 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Smco2Q9DA21 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Smco2Q9DA21 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
Smco2Q9DA21 Gm7860-201ENSMUST00000121190 879 ntBASIC21.21■□□□□ 0.99
Smco2Q9DA21 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC21.21■□□□□ 0.99
Smco2Q9DA21 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC21.21■□□□□ 0.99
Smco2Q9DA21 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC21.21■□□□□ 0.99
Smco2Q9DA21 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
Smco2Q9DA21 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC21.2■□□□□ 0.98
Smco2Q9DA21 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Smco2Q9DA21 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Smco2Q9DA21 Gm6420-201ENSMUST00000193885 723 ntBASIC21.2■□□□□ 0.98
Smco2Q9DA21 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Smco2Q9DA21 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Smco2Q9DA21 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Smco2Q9DA21 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC21.19■□□□□ 0.98
Smco2Q9DA21 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Smco2Q9DA21 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Smco2Q9DA21 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Smco2Q9DA21 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC21.19■□□□□ 0.98
Smco2Q9DA21 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Smco2Q9DA21 AC112142.1-201ENSMUST00000228796 918 ntBASIC21.19■□□□□ 0.98
Smco2Q9DA21 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Smco2Q9DA21 Gm10655-201ENSMUST00000098658 1397 ntBASIC21.19■□□□□ 0.98
Smco2Q9DA21 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Smco2Q9DA21 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Smco2Q9DA21 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Smco2Q9DA21 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Smco2Q9DA21 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Smco2Q9DA21 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC21.18■□□□□ 0.98
Smco2Q9DA21 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Smco2Q9DA21 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Smco2Q9DA21 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Smco2Q9DA21 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC21.18■□□□□ 0.98
Smco2Q9DA21 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Smco2Q9DA21 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Smco2Q9DA21 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Smco2Q9DA21 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Smco2Q9DA21 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC21.18■□□□□ 0.98
Smco2Q9DA21 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Smco2Q9DA21 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Smco2Q9DA21 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Smco2Q9DA21 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Smco2Q9DA21 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC21.17■□□□□ 0.98
Smco2Q9DA21 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC21.17■□□□□ 0.98
Smco2Q9DA21 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC21.17■□□□□ 0.98
Smco2Q9DA21 Gm27011-201ENSMUST00000182352 972 ntBASIC21.17■□□□□ 0.98
Smco2Q9DA21 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC21.17■□□□□ 0.98
Smco2Q9DA21 Gm6365-201ENSMUST00000054711 744 ntBASIC21.17■□□□□ 0.98
Smco2Q9DA21 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Smco2Q9DA21 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Smco2Q9DA21 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Smco2Q9DA21 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC21.17■□□□□ 0.98
Smco2Q9DA21 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Smco2Q9DA21 Hsf1-204ENSMUST00000226872 2104 ntBASIC21.17■□□□□ 0.98
Smco2Q9DA21 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Smco2Q9DA21 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC21.17■□□□□ 0.98
Smco2Q9DA21 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Smco2Q9DA21 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Smco2Q9DA21 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC21.16■□□□□ 0.98
Smco2Q9DA21 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Smco2Q9DA21 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Smco2Q9DA21 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC21.16■□□□□ 0.98
Smco2Q9DA21 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Smco2Q9DA21 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Smco2Q9DA21 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC21.16■□□□□ 0.98
Smco2Q9DA21 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Smco2Q9DA21 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC21.16■□□□□ 0.98
Smco2Q9DA21 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Smco2Q9DA21 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Smco2Q9DA21 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Smco2Q9DA21 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Smco2Q9DA21 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Smco2Q9DA21 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Smco2Q9DA21 Gm7290-201ENSMUST00000104990 617 ntBASIC21.15■□□□□ 0.98
Smco2Q9DA21 Gm12918-201ENSMUST00000120234 636 ntBASIC21.15■□□□□ 0.98
Smco2Q9DA21 Gm15710-201ENSMUST00000121821 636 ntBASIC21.15■□□□□ 0.98
Smco2Q9DA21 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms