Protein–RNA interactions for Protein: Q9D7V1

Sh2d4a, SH2 domain-containing protein 4A, mousemouse

Predictions only

Length 421 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d4aQ9D7V1 Gm37352-201ENSMUST00000193908 2181 ntBASIC18.27■□□□□ 0.51
Sh2d4aQ9D7V1 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Sh2d4aQ9D7V1 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
Sh2d4aQ9D7V1 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Sh2d4aQ9D7V1 Rarb-207ENSMUST00000225921 2756 ntBASIC18.26■□□□□ 0.51
Sh2d4aQ9D7V1 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Sh2d4aQ9D7V1 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sh2d4aQ9D7V1 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sh2d4aQ9D7V1 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Sh2d4aQ9D7V1 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Sh2d4aQ9D7V1 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sh2d4aQ9D7V1 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Sh2d4aQ9D7V1 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC18.26■□□□□ 0.51
Sh2d4aQ9D7V1 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sh2d4aQ9D7V1 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sh2d4aQ9D7V1 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sh2d4aQ9D7V1 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sh2d4aQ9D7V1 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
Sh2d4aQ9D7V1 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sh2d4aQ9D7V1 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sh2d4aQ9D7V1 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sh2d4aQ9D7V1 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sh2d4aQ9D7V1 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Sh2d4aQ9D7V1 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sh2d4aQ9D7V1 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sh2d4aQ9D7V1 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Sh2d4aQ9D7V1 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sh2d4aQ9D7V1 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Sh2d4aQ9D7V1 Gm45102-201ENSMUST00000207427 857 ntBASIC18.25■□□□□ 0.51
Sh2d4aQ9D7V1 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Sh2d4aQ9D7V1 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Sh2d4aQ9D7V1 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sh2d4aQ9D7V1 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sh2d4aQ9D7V1 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sh2d4aQ9D7V1 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC18.25■□□□□ 0.51
Sh2d4aQ9D7V1 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.24■□□□□ 0.51
Sh2d4aQ9D7V1 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sh2d4aQ9D7V1 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC18.24■□□□□ 0.51
Sh2d4aQ9D7V1 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Sh2d4aQ9D7V1 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Sh2d4aQ9D7V1 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC18.24■□□□□ 0.51
Sh2d4aQ9D7V1 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sh2d4aQ9D7V1 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Sh2d4aQ9D7V1 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Sh2d4aQ9D7V1 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Sh2d4aQ9D7V1 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sh2d4aQ9D7V1 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sh2d4aQ9D7V1 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sh2d4aQ9D7V1 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sh2d4aQ9D7V1 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC18.23■□□□□ 0.51
Sh2d4aQ9D7V1 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Sh2d4aQ9D7V1 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC18.23■□□□□ 0.51
Sh2d4aQ9D7V1 Shroom3-211ENSMUST00000225438 5742 ntBASIC18.23■□□□□ 0.51
Sh2d4aQ9D7V1 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Sh2d4aQ9D7V1 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
Sh2d4aQ9D7V1 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sh2d4aQ9D7V1 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sh2d4aQ9D7V1 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Sh2d4aQ9D7V1 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Sh2d4aQ9D7V1 Gm32699-201ENSMUST00000221728 1988 ntBASIC18.22■□□□□ 0.51
Sh2d4aQ9D7V1 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sh2d4aQ9D7V1 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
Sh2d4aQ9D7V1 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.22■□□□□ 0.51
Sh2d4aQ9D7V1 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Sh2d4aQ9D7V1 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Sh2d4aQ9D7V1 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sh2d4aQ9D7V1 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.22■□□□□ 0.51
Sh2d4aQ9D7V1 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sh2d4aQ9D7V1 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sh2d4aQ9D7V1 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sh2d4aQ9D7V1 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sh2d4aQ9D7V1 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
Sh2d4aQ9D7V1 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC18.22■□□□□ 0.51
Sh2d4aQ9D7V1 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Sh2d4aQ9D7V1 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sh2d4aQ9D7V1 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Sh2d4aQ9D7V1 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sh2d4aQ9D7V1 BC021767-201ENSMUST00000126387 1716 ntBASIC18.21■□□□□ 0.51
Sh2d4aQ9D7V1 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sh2d4aQ9D7V1 Gm42911-201ENSMUST00000199360 1630 ntBASIC18.21■□□□□ 0.51
Sh2d4aQ9D7V1 Gm14117-201ENSMUST00000122417 843 ntBASIC18.21■□□□□ 0.51
Sh2d4aQ9D7V1 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC18.21■□□□□ 0.51
Sh2d4aQ9D7V1 Serp2-204ENSMUST00000228055 705 ntBASIC18.21■□□□□ 0.51
Sh2d4aQ9D7V1 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sh2d4aQ9D7V1 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC18.21■□□□□ 0.51
Sh2d4aQ9D7V1 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Sh2d4aQ9D7V1 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sh2d4aQ9D7V1 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Sh2d4aQ9D7V1 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Sh2d4aQ9D7V1 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.5
Sh2d4aQ9D7V1 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sh2d4aQ9D7V1 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Sh2d4aQ9D7V1 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sh2d4aQ9D7V1 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC18.2■□□□□ 0.5
Sh2d4aQ9D7V1 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sh2d4aQ9D7V1 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Sh2d4aQ9D7V1 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sh2d4aQ9D7V1 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC18.2■□□□□ 0.5
Sh2d4aQ9D7V1 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC18.2■□□□□ 0.5
Sh2d4aQ9D7V1 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms