Protein–RNA interactions for Protein: Q9D706

Rpap3, RNA polymerase II-associated protein 3, mousemouse

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap3Q9D706 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Rpap3Q9D706 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC20.9■□□□□ 0.94
Rpap3Q9D706 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rpap3Q9D706 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Rpap3Q9D706 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rpap3Q9D706 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rpap3Q9D706 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Rpap3Q9D706 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC20.89■□□□□ 0.93
Rpap3Q9D706 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rpap3Q9D706 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Rpap3Q9D706 Gm12527-201ENSMUST00000117967 564 ntBASIC20.89■□□□□ 0.93
Rpap3Q9D706 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC20.89■□□□□ 0.93
Rpap3Q9D706 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Rpap3Q9D706 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rpap3Q9D706 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Rpap3Q9D706 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rpap3Q9D706 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rpap3Q9D706 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Rpap3Q9D706 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Rpap3Q9D706 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rpap3Q9D706 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rpap3Q9D706 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rpap3Q9D706 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rpap3Q9D706 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rpap3Q9D706 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC20.88■□□□□ 0.93
Rpap3Q9D706 Gm10653-202ENSMUST00000139570 835 ntBASIC20.88■□□□□ 0.93
Rpap3Q9D706 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Rpap3Q9D706 Gm19094-201ENSMUST00000209791 1246 ntBASIC20.88■□□□□ 0.93
Rpap3Q9D706 Rab3c-203ENSMUST00000224180 967 ntBASIC20.88■□□□□ 0.93
Rpap3Q9D706 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Rpap3Q9D706 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Rpap3Q9D706 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rpap3Q9D706 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rpap3Q9D706 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Rpap3Q9D706 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rpap3Q9D706 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC20.87■□□□□ 0.93
Rpap3Q9D706 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rpap3Q9D706 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC20.87■□□□□ 0.93
Rpap3Q9D706 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rpap3Q9D706 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rpap3Q9D706 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC20.87■□□□□ 0.93
Rpap3Q9D706 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rpap3Q9D706 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rpap3Q9D706 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Rpap3Q9D706 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rpap3Q9D706 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rpap3Q9D706 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rpap3Q9D706 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Rpap3Q9D706 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
Rpap3Q9D706 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Rpap3Q9D706 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rpap3Q9D706 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rpap3Q9D706 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.86■□□□□ 0.93
Rpap3Q9D706 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rpap3Q9D706 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rpap3Q9D706 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rpap3Q9D706 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rpap3Q9D706 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
Rpap3Q9D706 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC20.85■□□□□ 0.93
Rpap3Q9D706 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC20.85■□□□□ 0.93
Rpap3Q9D706 Gm20049-201ENSMUST00000219950 730 ntBASIC20.85■□□□□ 0.93
Rpap3Q9D706 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rpap3Q9D706 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.85■□□□□ 0.93
Rpap3Q9D706 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rpap3Q9D706 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rpap3Q9D706 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rpap3Q9D706 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Rpap3Q9D706 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC20.84■□□□□ 0.93
Rpap3Q9D706 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC20.84■□□□□ 0.93
Rpap3Q9D706 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC20.84■□□□□ 0.93
Rpap3Q9D706 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rpap3Q9D706 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rpap3Q9D706 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rpap3Q9D706 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Rpap3Q9D706 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Rpap3Q9D706 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC20.83■□□□□ 0.93
Rpap3Q9D706 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
Rpap3Q9D706 Gm20760-201ENSMUST00000179197 648 ntBASIC20.83■□□□□ 0.93
Rpap3Q9D706 Gm44672-201ENSMUST00000206944 1098 ntBASIC20.83■□□□□ 0.93
Rpap3Q9D706 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rpap3Q9D706 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
Rpap3Q9D706 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Rpap3Q9D706 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
Rpap3Q9D706 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.92
Rpap3Q9D706 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Rpap3Q9D706 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Rpap3Q9D706 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rpap3Q9D706 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rpap3Q9D706 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rpap3Q9D706 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Rpap3Q9D706 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rpap3Q9D706 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC20.82■□□□□ 0.92
Rpap3Q9D706 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC20.82■□□□□ 0.92
Rpap3Q9D706 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Rpap3Q9D706 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Rpap3Q9D706 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rpap3Q9D706 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Rpap3Q9D706 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rpap3Q9D706 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rpap3Q9D706 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms