Protein–RNA interactions for Protein: Q9D701

Upk3bl1, Uroplakin-3b-like protein 1, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bl1Q9D701 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Upk3bl1Q9D701 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Upk3bl1Q9D701 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Upk3bl1Q9D701 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Upk3bl1Q9D701 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC17.16■□□□□ 0.34
Upk3bl1Q9D701 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC17.16■□□□□ 0.34
Upk3bl1Q9D701 Cap2-205ENSMUST00000225824 1634 ntBASIC17.16■□□□□ 0.34
Upk3bl1Q9D701 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Upk3bl1Q9D701 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Upk3bl1Q9D701 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Upk3bl1Q9D701 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Upk3bl1Q9D701 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Upk3bl1Q9D701 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.16■□□□□ 0.34
Upk3bl1Q9D701 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Upk3bl1Q9D701 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Upk3bl1Q9D701 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Upk3bl1Q9D701 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Upk3bl1Q9D701 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Upk3bl1Q9D701 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
Upk3bl1Q9D701 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Upk3bl1Q9D701 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.15■□□□□ 0.34
Upk3bl1Q9D701 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC17.15■□□□□ 0.34
Upk3bl1Q9D701 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Upk3bl1Q9D701 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Upk3bl1Q9D701 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC17.15■□□□□ 0.34
Upk3bl1Q9D701 Gm43530-201ENSMUST00000195920 274 ntBASIC17.15■□□□□ 0.34
Upk3bl1Q9D701 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC17.15■□□□□ 0.34
Upk3bl1Q9D701 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC17.15■□□□□ 0.34
Upk3bl1Q9D701 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Upk3bl1Q9D701 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Upk3bl1Q9D701 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Upk3bl1Q9D701 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Upk3bl1Q9D701 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Upk3bl1Q9D701 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Upk3bl1Q9D701 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Upk3bl1Q9D701 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
Upk3bl1Q9D701 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Upk3bl1Q9D701 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Upk3bl1Q9D701 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Upk3bl1Q9D701 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.14■□□□□ 0.33
Upk3bl1Q9D701 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Upk3bl1Q9D701 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC17.14■□□□□ 0.33
Upk3bl1Q9D701 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Upk3bl1Q9D701 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Upk3bl1Q9D701 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Upk3bl1Q9D701 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Upk3bl1Q9D701 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Upk3bl1Q9D701 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Upk3bl1Q9D701 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Upk3bl1Q9D701 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Upk3bl1Q9D701 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Upk3bl1Q9D701 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Upk3bl1Q9D701 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Upk3bl1Q9D701 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Upk3bl1Q9D701 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Upk3bl1Q9D701 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Upk3bl1Q9D701 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Upk3bl1Q9D701 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Upk3bl1Q9D701 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Upk3bl1Q9D701 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Upk3bl1Q9D701 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Upk3bl1Q9D701 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Upk3bl1Q9D701 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC17.13■□□□□ 0.33
Upk3bl1Q9D701 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Upk3bl1Q9D701 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Upk3bl1Q9D701 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Upk3bl1Q9D701 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Upk3bl1Q9D701 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Upk3bl1Q9D701 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Upk3bl1Q9D701 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Upk3bl1Q9D701 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Upk3bl1Q9D701 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Upk3bl1Q9D701 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Upk3bl1Q9D701 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC17.12■□□□□ 0.33
Upk3bl1Q9D701 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Upk3bl1Q9D701 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC17.12■□□□□ 0.33
Upk3bl1Q9D701 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Upk3bl1Q9D701 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Upk3bl1Q9D701 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Upk3bl1Q9D701 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Upk3bl1Q9D701 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
Upk3bl1Q9D701 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Upk3bl1Q9D701 Gm43548-201ENSMUST00000197139 2353 ntBASIC17.11■□□□□ 0.33
Upk3bl1Q9D701 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Upk3bl1Q9D701 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Upk3bl1Q9D701 Gm10571-201ENSMUST00000097869 1638 ntBASIC17.11■□□□□ 0.33
Upk3bl1Q9D701 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Upk3bl1Q9D701 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Upk3bl1Q9D701 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC17.11■□□□□ 0.33
Upk3bl1Q9D701 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
Upk3bl1Q9D701 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Upk3bl1Q9D701 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Upk3bl1Q9D701 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Upk3bl1Q9D701 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Upk3bl1Q9D701 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
Upk3bl1Q9D701 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Upk3bl1Q9D701 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC17.1■□□□□ 0.33
Upk3bl1Q9D701 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Upk3bl1Q9D701 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Upk3bl1Q9D701 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms