Protein–RNA interactions for Protein: Q9D6I0

Rtl8c, Cxx1c protein, mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl8cQ9D6I0 Gm21168-201ENSMUST00000199646 1096 ntBASIC16.88■□□□□ 0.29
Rtl8cQ9D6I0 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rtl8cQ9D6I0 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Rtl8cQ9D6I0 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Rtl8cQ9D6I0 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rtl8cQ9D6I0 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Rtl8cQ9D6I0 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Rtl8cQ9D6I0 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Rtl8cQ9D6I0 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Rtl8cQ9D6I0 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rtl8cQ9D6I0 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rtl8cQ9D6I0 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rtl8cQ9D6I0 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC16.87■□□□□ 0.29
Rtl8cQ9D6I0 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
Rtl8cQ9D6I0 CT030146.1-201ENSMUST00000220919 217 ntBASIC16.87■□□□□ 0.29
Rtl8cQ9D6I0 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
Rtl8cQ9D6I0 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rtl8cQ9D6I0 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rtl8cQ9D6I0 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rtl8cQ9D6I0 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
Rtl8cQ9D6I0 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rtl8cQ9D6I0 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC16.86■□□□□ 0.29
Rtl8cQ9D6I0 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rtl8cQ9D6I0 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rtl8cQ9D6I0 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Rtl8cQ9D6I0 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rtl8cQ9D6I0 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC16.86■□□□□ 0.29
Rtl8cQ9D6I0 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rtl8cQ9D6I0 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Rtl8cQ9D6I0 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC16.86■□□□□ 0.29
Rtl8cQ9D6I0 Gm40848-201ENSMUST00000221998 324 ntBASIC16.86■□□□□ 0.29
Rtl8cQ9D6I0 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rtl8cQ9D6I0 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Rtl8cQ9D6I0 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC16.86■□□□□ 0.29
Rtl8cQ9D6I0 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Rtl8cQ9D6I0 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rtl8cQ9D6I0 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rtl8cQ9D6I0 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Rtl8cQ9D6I0 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rtl8cQ9D6I0 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rtl8cQ9D6I0 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rtl8cQ9D6I0 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Rtl8cQ9D6I0 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rtl8cQ9D6I0 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Rtl8cQ9D6I0 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC16.85■□□□□ 0.29
Rtl8cQ9D6I0 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rtl8cQ9D6I0 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
Rtl8cQ9D6I0 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
Rtl8cQ9D6I0 Gm27032-201ENSMUST00000183124 1116 ntBASIC16.85■□□□□ 0.29
Rtl8cQ9D6I0 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Rtl8cQ9D6I0 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rtl8cQ9D6I0 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rtl8cQ9D6I0 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Rtl8cQ9D6I0 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Rtl8cQ9D6I0 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Rtl8cQ9D6I0 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rtl8cQ9D6I0 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Rtl8cQ9D6I0 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
Rtl8cQ9D6I0 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Rtl8cQ9D6I0 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rtl8cQ9D6I0 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC16.85■□□□□ 0.29
Rtl8cQ9D6I0 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rtl8cQ9D6I0 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rtl8cQ9D6I0 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Rtl8cQ9D6I0 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Rtl8cQ9D6I0 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rtl8cQ9D6I0 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rtl8cQ9D6I0 Gm18688-201ENSMUST00000204695 1859 ntBASIC16.84■□□□□ 0.29
Rtl8cQ9D6I0 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rtl8cQ9D6I0 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Rtl8cQ9D6I0 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rtl8cQ9D6I0 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Rtl8cQ9D6I0 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Rtl8cQ9D6I0 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rtl8cQ9D6I0 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC16.84■□□□□ 0.29
Rtl8cQ9D6I0 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Rtl8cQ9D6I0 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rtl8cQ9D6I0 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC16.84■□□□□ 0.29
Rtl8cQ9D6I0 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rtl8cQ9D6I0 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC16.84■□□□□ 0.29
Rtl8cQ9D6I0 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rtl8cQ9D6I0 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rtl8cQ9D6I0 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rtl8cQ9D6I0 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Rtl8cQ9D6I0 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Rtl8cQ9D6I0 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.29
Rtl8cQ9D6I0 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Rtl8cQ9D6I0 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Rtl8cQ9D6I0 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Rtl8cQ9D6I0 BC021767-201ENSMUST00000126387 1716 ntBASIC16.83■□□□□ 0.28
Rtl8cQ9D6I0 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rtl8cQ9D6I0 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rtl8cQ9D6I0 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC16.83■□□□□ 0.28
Rtl8cQ9D6I0 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC16.83■□□□□ 0.28
Rtl8cQ9D6I0 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Rtl8cQ9D6I0 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC16.83■□□□□ 0.28
Rtl8cQ9D6I0 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rtl8cQ9D6I0 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rtl8cQ9D6I0 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Rtl8cQ9D6I0 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms