Protein–RNA interactions for Protein: Q9D071

Mms19, MMS19 nucleotide excision repair protein homolog, mousemouse

Predictions only

Length 1,031 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mms19Q9D071 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Mms19Q9D071 Gm37179-201ENSMUST00000194862 823 ntBASIC20.16■□□□□ 0.82
Mms19Q9D071 CT010467.1-202ENSMUST00000205406 714 ntBASIC20.16■□□□□ 0.82
Mms19Q9D071 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC20.16■□□□□ 0.82
Mms19Q9D071 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC20.16■□□□□ 0.82
Mms19Q9D071 Dapk1-207ENSMUST00000226059 5009 ntBASIC20.16■□□□□ 0.82
Mms19Q9D071 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Mms19Q9D071 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Mms19Q9D071 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Mms19Q9D071 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Mms19Q9D071 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Mms19Q9D071 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Mms19Q9D071 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
Mms19Q9D071 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC20.15■□□□□ 0.82
Mms19Q9D071 Spcs1-207ENSMUST00000228767 1008 ntBASIC20.15■□□□□ 0.82
Mms19Q9D071 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Mms19Q9D071 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Mms19Q9D071 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
Mms19Q9D071 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.82
Mms19Q9D071 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Mms19Q9D071 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
Mms19Q9D071 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Mms19Q9D071 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Mms19Q9D071 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC20.14■□□□□ 0.81
Mms19Q9D071 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Mms19Q9D071 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Mms19Q9D071 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Mms19Q9D071 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Mms19Q9D071 Ap3s1-204ENSMUST00000225520 957 ntBASIC20.14■□□□□ 0.81
Mms19Q9D071 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Mms19Q9D071 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Mms19Q9D071 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC20.14■□□□□ 0.81
Mms19Q9D071 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Mms19Q9D071 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Mms19Q9D071 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
Mms19Q9D071 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Mms19Q9D071 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Mms19Q9D071 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Mms19Q9D071 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC20.13■□□□□ 0.81
Mms19Q9D071 Gm7514-201ENSMUST00000209475 934 ntBASIC20.13■□□□□ 0.81
Mms19Q9D071 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Mms19Q9D071 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Mms19Q9D071 Gm43545-201ENSMUST00000196765 2779 ntBASIC20.13■□□□□ 0.81
Mms19Q9D071 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Mms19Q9D071 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Mms19Q9D071 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Mms19Q9D071 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Mms19Q9D071 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Mms19Q9D071 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Mms19Q9D071 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Mms19Q9D071 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Mms19Q9D071 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Mms19Q9D071 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Mms19Q9D071 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Mms19Q9D071 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Mms19Q9D071 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Mms19Q9D071 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Mms19Q9D071 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Mms19Q9D071 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Mms19Q9D071 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Mms19Q9D071 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Mms19Q9D071 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Mms19Q9D071 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC20.11■□□□□ 0.81
Mms19Q9D071 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Mms19Q9D071 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Mms19Q9D071 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Mms19Q9D071 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Mms19Q9D071 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Mms19Q9D071 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Mms19Q9D071 Gm37352-201ENSMUST00000193908 2181 ntBASIC20.11■□□□□ 0.81
Mms19Q9D071 Hsf1-204ENSMUST00000226872 2104 ntBASIC20.11■□□□□ 0.81
Mms19Q9D071 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Mms19Q9D071 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Mms19Q9D071 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Mms19Q9D071 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Mms19Q9D071 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Mms19Q9D071 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Mms19Q9D071 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Mms19Q9D071 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Mms19Q9D071 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Mms19Q9D071 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
Mms19Q9D071 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Mms19Q9D071 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Mms19Q9D071 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC20.1■□□□□ 0.81
Mms19Q9D071 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Mms19Q9D071 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Mms19Q9D071 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Mms19Q9D071 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
Mms19Q9D071 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC20.09■□□□□ 0.81
Mms19Q9D071 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC20.09■□□□□ 0.81
Mms19Q9D071 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Mms19Q9D071 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Mms19Q9D071 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
Mms19Q9D071 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Mms19Q9D071 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Mms19Q9D071 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Mms19Q9D071 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC20.08■□□□□ 0.81
Mms19Q9D071 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Mms19Q9D071 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
Mms19Q9D071 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC20.08■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms