Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Trim13Q9CYB0 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim13Q9CYB0 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim13Q9CYB0 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Trim13Q9CYB0 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim13Q9CYB0 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.44■□□□□ 0.38
Trim13Q9CYB0 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim13Q9CYB0 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Trim13Q9CYB0 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim13Q9CYB0 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim13Q9CYB0 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim13Q9CYB0 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim13Q9CYB0 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim13Q9CYB0 Krt8-ps-201ENSMUST00000208495 945 ntBASIC17.43■□□□□ 0.38
Trim13Q9CYB0 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim13Q9CYB0 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim13Q9CYB0 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
Trim13Q9CYB0 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Trim13Q9CYB0 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trim13Q9CYB0 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim13Q9CYB0 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Trim13Q9CYB0 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC17.43■□□□□ 0.38
Trim13Q9CYB0 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim13Q9CYB0 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.43■□□□□ 0.38
Trim13Q9CYB0 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC17.42■□□□□ 0.38
Trim13Q9CYB0 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim13Q9CYB0 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim13Q9CYB0 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim13Q9CYB0 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim13Q9CYB0 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Trim13Q9CYB0 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim13Q9CYB0 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC17.42■□□□□ 0.38
Trim13Q9CYB0 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Trim13Q9CYB0 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Trim13Q9CYB0 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim13Q9CYB0 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC17.42■□□□□ 0.38
Trim13Q9CYB0 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim13Q9CYB0 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim13Q9CYB0 Rncr4-201ENSMUST00000194541 2234 ntBASIC17.41■□□□□ 0.38
Trim13Q9CYB0 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trim13Q9CYB0 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim13Q9CYB0 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Trim13Q9CYB0 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim13Q9CYB0 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trim13Q9CYB0 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trim13Q9CYB0 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trim13Q9CYB0 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim13Q9CYB0 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trim13Q9CYB0 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim13Q9CYB0 Gm7417-201ENSMUST00000192950 473 ntBASIC17.41■□□□□ 0.38
Trim13Q9CYB0 Gm45102-201ENSMUST00000207427 857 ntBASIC17.41■□□□□ 0.38
Trim13Q9CYB0 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim13Q9CYB0 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim13Q9CYB0 Gm9959-201ENSMUST00000068277 390 ntBASIC17.41■□□□□ 0.38
Trim13Q9CYB0 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim13Q9CYB0 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim13Q9CYB0 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim13Q9CYB0 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim13Q9CYB0 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
Trim13Q9CYB0 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim13Q9CYB0 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim13Q9CYB0 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Trim13Q9CYB0 Gm38342-201ENSMUST00000195710 2980 ntBASIC17.4■□□□□ 0.38
Trim13Q9CYB0 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Trim13Q9CYB0 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim13Q9CYB0 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim13Q9CYB0 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim13Q9CYB0 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim13Q9CYB0 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim13Q9CYB0 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC17.4■□□□□ 0.38
Trim13Q9CYB0 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC17.4■□□□□ 0.38
Trim13Q9CYB0 AC154266.1-201ENSMUST00000223190 503 ntBASIC17.4■□□□□ 0.38
Trim13Q9CYB0 Rps24-207ENSMUST00000224568 714 ntBASIC17.4■□□□□ 0.38
Trim13Q9CYB0 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim13Q9CYB0 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim13Q9CYB0 Gm37352-201ENSMUST00000193908 2181 ntBASIC17.4■□□□□ 0.38
Trim13Q9CYB0 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim13Q9CYB0 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim13Q9CYB0 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Trim13Q9CYB0 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Trim13Q9CYB0 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim13Q9CYB0 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Trim13Q9CYB0 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC17.39■□□□□ 0.38
Trim13Q9CYB0 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
Trim13Q9CYB0 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim13Q9CYB0 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Trim13Q9CYB0 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim13Q9CYB0 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
Trim13Q9CYB0 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim13Q9CYB0 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim13Q9CYB0 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim13Q9CYB0 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim13Q9CYB0 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim13Q9CYB0 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim13Q9CYB0 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim13Q9CYB0 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Trim13Q9CYB0 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim13Q9CYB0 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim13Q9CYB0 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Trim13Q9CYB0 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms