Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Grk6-206ENSMUST00000224995 2971 ntBASIC17.77■□□□□ 0.44
Ska1Q9CPV1 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Ska1Q9CPV1 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ska1Q9CPV1 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Ska1Q9CPV1 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ska1Q9CPV1 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Ska1Q9CPV1 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Ska1Q9CPV1 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ska1Q9CPV1 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Ska1Q9CPV1 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ska1Q9CPV1 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ska1Q9CPV1 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Ska1Q9CPV1 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ska1Q9CPV1 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC17.76■□□□□ 0.43
Ska1Q9CPV1 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Ska1Q9CPV1 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ska1Q9CPV1 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ska1Q9CPV1 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ska1Q9CPV1 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC17.75■□□□□ 0.43
Ska1Q9CPV1 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Ska1Q9CPV1 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC17.75■□□□□ 0.43
Ska1Q9CPV1 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Ska1Q9CPV1 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.75■□□□□ 0.43
Ska1Q9CPV1 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ska1Q9CPV1 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ska1Q9CPV1 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ska1Q9CPV1 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ska1Q9CPV1 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ska1Q9CPV1 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ska1Q9CPV1 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ska1Q9CPV1 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Ska1Q9CPV1 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Ska1Q9CPV1 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC17.74■□□□□ 0.43
Ska1Q9CPV1 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Ska1Q9CPV1 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ska1Q9CPV1 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ska1Q9CPV1 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ska1Q9CPV1 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ska1Q9CPV1 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Ska1Q9CPV1 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ska1Q9CPV1 Gm32699-201ENSMUST00000221728 1988 ntBASIC17.73■□□□□ 0.43
Ska1Q9CPV1 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Ska1Q9CPV1 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ska1Q9CPV1 AC154231.1-201ENSMUST00000220564 2175 ntBASIC17.73■□□□□ 0.43
Ska1Q9CPV1 Gm10571-201ENSMUST00000097869 1638 ntBASIC17.73■□□□□ 0.43
Ska1Q9CPV1 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ska1Q9CPV1 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Ska1Q9CPV1 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Ska1Q9CPV1 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC17.73■□□□□ 0.43
Ska1Q9CPV1 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC17.73■□□□□ 0.43
Ska1Q9CPV1 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC17.73■□□□□ 0.43
Ska1Q9CPV1 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Ska1Q9CPV1 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ska1Q9CPV1 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC17.73■□□□□ 0.43
Ska1Q9CPV1 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ska1Q9CPV1 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ska1Q9CPV1 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Ska1Q9CPV1 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ska1Q9CPV1 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ska1Q9CPV1 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Ska1Q9CPV1 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ska1Q9CPV1 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ska1Q9CPV1 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ska1Q9CPV1 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.72■□□□□ 0.43
Ska1Q9CPV1 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
Ska1Q9CPV1 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Ska1Q9CPV1 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ska1Q9CPV1 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ska1Q9CPV1 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC17.72■□□□□ 0.43
Ska1Q9CPV1 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Ska1Q9CPV1 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC17.72■□□□□ 0.43
Ska1Q9CPV1 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ska1Q9CPV1 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ska1Q9CPV1 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ska1Q9CPV1 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC17.71■□□□□ 0.43
Ska1Q9CPV1 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ska1Q9CPV1 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Ska1Q9CPV1 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ska1Q9CPV1 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC17.71■□□□□ 0.43
Ska1Q9CPV1 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC17.71■□□□□ 0.43
Ska1Q9CPV1 Gm5576-201ENSMUST00000075809 1236 ntBASIC17.71■□□□□ 0.43
Ska1Q9CPV1 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Ska1Q9CPV1 Gm10209-201ENSMUST00000203397 1607 ntBASIC17.71■□□□□ 0.43
Ska1Q9CPV1 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ska1Q9CPV1 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ska1Q9CPV1 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Ska1Q9CPV1 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ska1Q9CPV1 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ska1Q9CPV1 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ska1Q9CPV1 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC17.7■□□□□ 0.42
Ska1Q9CPV1 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Ska1Q9CPV1 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ska1Q9CPV1 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Ska1Q9CPV1 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ska1Q9CPV1 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Ska1Q9CPV1 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
Ska1Q9CPV1 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ska1Q9CPV1 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ska1Q9CPV1 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ska1Q9CPV1 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 114.7 ms