Protein–RNA interactions for Protein: Q99PI8

Rtn4r, Reticulon-4 receptor, mousemouse

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4rQ99PI8 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Rtn4rQ99PI8 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rtn4rQ99PI8 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Rtn4rQ99PI8 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Rtn4rQ99PI8 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Rtn4rQ99PI8 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Rtn4rQ99PI8 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Rtn4rQ99PI8 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rtn4rQ99PI8 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Rtn4rQ99PI8 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC16.64■□□□□ 0.25
Rtn4rQ99PI8 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Rtn4rQ99PI8 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rtn4rQ99PI8 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rtn4rQ99PI8 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Rtn4rQ99PI8 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rtn4rQ99PI8 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Rtn4rQ99PI8 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rtn4rQ99PI8 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Rtn4rQ99PI8 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Rtn4rQ99PI8 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rtn4rQ99PI8 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rtn4rQ99PI8 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Rtn4rQ99PI8 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Rtn4rQ99PI8 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Rtn4rQ99PI8 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Rtn4rQ99PI8 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC16.63■□□□□ 0.25
Rtn4rQ99PI8 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rtn4rQ99PI8 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rtn4rQ99PI8 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rtn4rQ99PI8 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Rtn4rQ99PI8 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rtn4rQ99PI8 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rtn4rQ99PI8 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Rtn4rQ99PI8 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Rtn4rQ99PI8 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rtn4rQ99PI8 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rtn4rQ99PI8 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rtn4rQ99PI8 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rtn4rQ99PI8 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rtn4rQ99PI8 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Rtn4rQ99PI8 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rtn4rQ99PI8 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Rtn4rQ99PI8 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rtn4rQ99PI8 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rtn4rQ99PI8 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rtn4rQ99PI8 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rtn4rQ99PI8 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rtn4rQ99PI8 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rtn4rQ99PI8 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Rtn4rQ99PI8 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC16.61■□□□□ 0.25
Rtn4rQ99PI8 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rtn4rQ99PI8 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Rtn4rQ99PI8 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
Rtn4rQ99PI8 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC16.61■□□□□ 0.25
Rtn4rQ99PI8 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Rtn4rQ99PI8 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rtn4rQ99PI8 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rtn4rQ99PI8 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Rtn4rQ99PI8 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rtn4rQ99PI8 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rtn4rQ99PI8 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Rtn4rQ99PI8 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC16.6■□□□□ 0.25
Rtn4rQ99PI8 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC16.6■□□□□ 0.25
Rtn4rQ99PI8 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rtn4rQ99PI8 Golph3-205ENSMUST00000228671 2842 ntBASIC16.6■□□□□ 0.25
Rtn4rQ99PI8 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rtn4rQ99PI8 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rtn4rQ99PI8 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rtn4rQ99PI8 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Rtn4rQ99PI8 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rtn4rQ99PI8 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rtn4rQ99PI8 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Rtn4rQ99PI8 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rtn4rQ99PI8 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rtn4rQ99PI8 Gm13534-201ENSMUST00000121169 513 ntBASIC16.59■□□□□ 0.25
Rtn4rQ99PI8 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Rtn4rQ99PI8 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC16.59■□□□□ 0.25
Rtn4rQ99PI8 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC16.59■□□□□ 0.25
Rtn4rQ99PI8 Gm7514-201ENSMUST00000209475 934 ntBASIC16.59■□□□□ 0.25
Rtn4rQ99PI8 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rtn4rQ99PI8 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rtn4rQ99PI8 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rtn4rQ99PI8 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Rtn4rQ99PI8 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Rtn4rQ99PI8 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rtn4rQ99PI8 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rtn4rQ99PI8 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Rtn4rQ99PI8 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC16.58■□□□□ 0.24
Rtn4rQ99PI8 Gm37179-201ENSMUST00000194862 823 ntBASIC16.58■□□□□ 0.24
Rtn4rQ99PI8 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rtn4rQ99PI8 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Rtn4rQ99PI8 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rtn4rQ99PI8 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rtn4rQ99PI8 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Rtn4rQ99PI8 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Rtn4rQ99PI8 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rtn4rQ99PI8 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rtn4rQ99PI8 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC16.58■□□□□ 0.24
Rtn4rQ99PI8 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rtn4rQ99PI8 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms