Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Col25a1Q99MQ5 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Col25a1Q99MQ5 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Col25a1Q99MQ5 AC130713.1-201ENSMUST00000228853 1096 ntBASIC19.64■□□□□ 0.73
Col25a1Q99MQ5 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
Col25a1Q99MQ5 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Col25a1Q99MQ5 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Col25a1Q99MQ5 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Col25a1Q99MQ5 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.63■□□□□ 0.73
Col25a1Q99MQ5 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Col25a1Q99MQ5 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Col25a1Q99MQ5 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Col25a1Q99MQ5 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Col25a1Q99MQ5 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Col25a1Q99MQ5 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
Col25a1Q99MQ5 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Col25a1Q99MQ5 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Col25a1Q99MQ5 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Col25a1Q99MQ5 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC19.63■□□□□ 0.73
Col25a1Q99MQ5 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
Col25a1Q99MQ5 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC19.63■□□□□ 0.73
Col25a1Q99MQ5 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Col25a1Q99MQ5 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Col25a1Q99MQ5 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Col25a1Q99MQ5 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Col25a1Q99MQ5 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Col25a1Q99MQ5 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Col25a1Q99MQ5 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Col25a1Q99MQ5 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col25a1Q99MQ5 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col25a1Q99MQ5 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Col25a1Q99MQ5 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19.62■□□□□ 0.73
Col25a1Q99MQ5 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col25a1Q99MQ5 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col25a1Q99MQ5 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Col25a1Q99MQ5 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col25a1Q99MQ5 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Col25a1Q99MQ5 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Col25a1Q99MQ5 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Col25a1Q99MQ5 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC19.61■□□□□ 0.73
Col25a1Q99MQ5 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Col25a1Q99MQ5 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Col25a1Q99MQ5 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Col25a1Q99MQ5 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Col25a1Q99MQ5 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Col25a1Q99MQ5 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Col25a1Q99MQ5 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Col25a1Q99MQ5 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Col25a1Q99MQ5 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC19.6■□□□□ 0.73
Col25a1Q99MQ5 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Col25a1Q99MQ5 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Col25a1Q99MQ5 Gm17971-201ENSMUST00000190239 806 ntBASIC19.6■□□□□ 0.73
Col25a1Q99MQ5 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Col25a1Q99MQ5 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Col25a1Q99MQ5 Snhg20-203ENSMUST00000182811 2153 ntBASIC19.6■□□□□ 0.73
Col25a1Q99MQ5 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
Col25a1Q99MQ5 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Col25a1Q99MQ5 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Col25a1Q99MQ5 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Col25a1Q99MQ5 Gm23634-201ENSMUST00000175071 91 ntBASIC19.59■□□□□ 0.73
Col25a1Q99MQ5 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Col25a1Q99MQ5 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Col25a1Q99MQ5 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Col25a1Q99MQ5 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Col25a1Q99MQ5 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Col25a1Q99MQ5 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Col25a1Q99MQ5 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Col25a1Q99MQ5 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
Col25a1Q99MQ5 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Col25a1Q99MQ5 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Col25a1Q99MQ5 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Col25a1Q99MQ5 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Col25a1Q99MQ5 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.58■□□□□ 0.73
Col25a1Q99MQ5 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Col25a1Q99MQ5 Gm21596-201ENSMUST00000178049 1316 ntBASIC19.58■□□□□ 0.73
Col25a1Q99MQ5 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Col25a1Q99MQ5 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Col25a1Q99MQ5 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC19.58■□□□□ 0.72
Col25a1Q99MQ5 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC19.58■□□□□ 0.72
Col25a1Q99MQ5 Gm6345-202ENSMUST00000180900 204 ntBASIC19.58■□□□□ 0.72
Col25a1Q99MQ5 CT030146.1-201ENSMUST00000220919 217 ntBASIC19.58■□□□□ 0.72
Col25a1Q99MQ5 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Col25a1Q99MQ5 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Col25a1Q99MQ5 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Col25a1Q99MQ5 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Col25a1Q99MQ5 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Col25a1Q99MQ5 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Col25a1Q99MQ5 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Col25a1Q99MQ5 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Col25a1Q99MQ5 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Col25a1Q99MQ5 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC19.57■□□□□ 0.72
Col25a1Q99MQ5 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC19.57■□□□□ 0.72
Col25a1Q99MQ5 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC19.57■□□□□ 0.72
Col25a1Q99MQ5 H2-K2-201ENSMUST00000174250 1049 ntBASIC19.57■□□□□ 0.72
Col25a1Q99MQ5 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Col25a1Q99MQ5 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Col25a1Q99MQ5 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Col25a1Q99MQ5 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Col25a1Q99MQ5 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Col25a1Q99MQ5 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms