Protein–RNA interactions for Protein: Q99K46

Usp11, Ubiquitin carboxyl-terminal hydrolase 11, mousemouse

Predictions only

Length 921 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp11Q99K46 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Usp11Q99K46 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC19.84■□□□□ 0.77
Usp11Q99K46 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Usp11Q99K46 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Usp11Q99K46 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Usp11Q99K46 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Usp11Q99K46 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Usp11Q99K46 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Usp11Q99K46 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Usp11Q99K46 Gm11421-201ENSMUST00000122124 294 ntBASIC19.83■□□□□ 0.77
Usp11Q99K46 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Usp11Q99K46 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Usp11Q99K46 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
Usp11Q99K46 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Usp11Q99K46 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
Usp11Q99K46 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.82■□□□□ 0.76
Usp11Q99K46 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Usp11Q99K46 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Usp11Q99K46 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Usp11Q99K46 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Usp11Q99K46 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Usp11Q99K46 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Usp11Q99K46 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Usp11Q99K46 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Usp11Q99K46 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Usp11Q99K46 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Usp11Q99K46 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Usp11Q99K46 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Usp11Q99K46 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Usp11Q99K46 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Usp11Q99K46 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Usp11Q99K46 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Usp11Q99K46 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC19.81■□□□□ 0.76
Usp11Q99K46 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Usp11Q99K46 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
Usp11Q99K46 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC19.81■□□□□ 0.76
Usp11Q99K46 Gm40848-201ENSMUST00000221998 324 ntBASIC19.81■□□□□ 0.76
Usp11Q99K46 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Usp11Q99K46 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Usp11Q99K46 AA386476-201ENSMUST00000098781 1665 ntBASIC19.81■□□□□ 0.76
Usp11Q99K46 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Usp11Q99K46 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Usp11Q99K46 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Usp11Q99K46 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Usp11Q99K46 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Usp11Q99K46 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Usp11Q99K46 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Usp11Q99K46 Gm43060-201ENSMUST00000200621 289 ntBASIC19.8■□□□□ 0.76
Usp11Q99K46 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Usp11Q99K46 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Usp11Q99K46 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Usp11Q99K46 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Usp11Q99K46 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Usp11Q99K46 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Usp11Q99K46 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Usp11Q99K46 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Usp11Q99K46 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Usp11Q99K46 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Usp11Q99K46 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Usp11Q99K46 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC19.79■□□□□ 0.76
Usp11Q99K46 AC137127.1-201ENSMUST00000213466 1078 ntBASIC19.79■□□□□ 0.76
Usp11Q99K46 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Usp11Q99K46 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Usp11Q99K46 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Usp11Q99K46 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Usp11Q99K46 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Usp11Q99K46 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Usp11Q99K46 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Usp11Q99K46 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC19.78■□□□□ 0.76
Usp11Q99K46 Gm10571-201ENSMUST00000097869 1638 ntBASIC19.78■□□□□ 0.76
Usp11Q99K46 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Usp11Q99K46 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Usp11Q99K46 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Usp11Q99K46 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Usp11Q99K46 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Usp11Q99K46 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Usp11Q99K46 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
Usp11Q99K46 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Usp11Q99K46 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Usp11Q99K46 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Usp11Q99K46 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Usp11Q99K46 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Usp11Q99K46 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC19.77■□□□□ 0.76
Usp11Q99K46 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Usp11Q99K46 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Usp11Q99K46 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Usp11Q99K46 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Usp11Q99K46 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Usp11Q99K46 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Usp11Q99K46 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Usp11Q99K46 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Usp11Q99K46 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC19.76■□□□□ 0.75
Usp11Q99K46 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Usp11Q99K46 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Usp11Q99K46 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
Usp11Q99K46 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Usp11Q99K46 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC19.75■□□□□ 0.75
Usp11Q99K46 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Usp11Q99K46 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Usp11Q99K46 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms