Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhb3Q91XZ7 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhb3Q91XZ7 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC18.79■□□□□ 0.6
Pcdhb3Q91XZ7 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
Pcdhb3Q91XZ7 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhb3Q91XZ7 AC166356.1-201ENSMUST00000228236 1426 ntBASIC18.79■□□□□ 0.6
Pcdhb3Q91XZ7 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhb3Q91XZ7 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhb3Q91XZ7 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhb3Q91XZ7 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhb3Q91XZ7 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhb3Q91XZ7 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC18.78■□□□□ 0.6
Pcdhb3Q91XZ7 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhb3Q91XZ7 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhb3Q91XZ7 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Pcdhb3Q91XZ7 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhb3Q91XZ7 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC18.78■□□□□ 0.6
Pcdhb3Q91XZ7 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhb3Q91XZ7 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhb3Q91XZ7 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhb3Q91XZ7 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhb3Q91XZ7 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Pcdhb3Q91XZ7 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhb3Q91XZ7 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC18.78■□□□□ 0.6
Pcdhb3Q91XZ7 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhb3Q91XZ7 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC18.78■□□□□ 0.6
Pcdhb3Q91XZ7 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhb3Q91XZ7 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhb3Q91XZ7 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Pcdhb3Q91XZ7 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhb3Q91XZ7 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhb3Q91XZ7 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhb3Q91XZ7 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhb3Q91XZ7 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Pcdhb3Q91XZ7 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhb3Q91XZ7 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhb3Q91XZ7 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhb3Q91XZ7 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.77■□□□□ 0.6
Pcdhb3Q91XZ7 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
Pcdhb3Q91XZ7 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Pcdhb3Q91XZ7 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC18.76■□□□□ 0.59
Pcdhb3Q91XZ7 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhb3Q91XZ7 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhb3Q91XZ7 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhb3Q91XZ7 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhb3Q91XZ7 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhb3Q91XZ7 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhb3Q91XZ7 Gm27454-201ENSMUST00000185090 204 ntBASIC18.75■□□□□ 0.59
Pcdhb3Q91XZ7 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhb3Q91XZ7 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhb3Q91XZ7 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhb3Q91XZ7 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhb3Q91XZ7 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhb3Q91XZ7 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhb3Q91XZ7 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhb3Q91XZ7 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhb3Q91XZ7 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhb3Q91XZ7 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhb3Q91XZ7 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhb3Q91XZ7 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Pcdhb3Q91XZ7 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhb3Q91XZ7 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
Pcdhb3Q91XZ7 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Pcdhb3Q91XZ7 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhb3Q91XZ7 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhb3Q91XZ7 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhb3Q91XZ7 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC18.74■□□□□ 0.59
Pcdhb3Q91XZ7 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhb3Q91XZ7 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhb3Q91XZ7 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhb3Q91XZ7 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhb3Q91XZ7 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhb3Q91XZ7 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhb3Q91XZ7 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhb3Q91XZ7 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhb3Q91XZ7 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhb3Q91XZ7 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhb3Q91XZ7 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC18.73■□□□□ 0.59
Pcdhb3Q91XZ7 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhb3Q91XZ7 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhb3Q91XZ7 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhb3Q91XZ7 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhb3Q91XZ7 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhb3Q91XZ7 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhb3Q91XZ7 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhb3Q91XZ7 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhb3Q91XZ7 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhb3Q91XZ7 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhb3Q91XZ7 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhb3Q91XZ7 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC18.73■□□□□ 0.59
Pcdhb3Q91XZ7 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Pcdhb3Q91XZ7 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhb3Q91XZ7 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhb3Q91XZ7 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhb3Q91XZ7 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhb3Q91XZ7 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhb3Q91XZ7 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhb3Q91XZ7 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhb3Q91XZ7 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhb3Q91XZ7 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC18.72■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms