Protein–RNA interactions for Protein: Q91XX5

Pcdhgb5, Protocadherin gamma B5, mousemouse

Predictions only

Length 926 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb5Q91XX5 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhgb5Q91XX5 Gm37856-201ENSMUST00000191634 999 ntBASIC18.76■□□□□ 0.59
Pcdhgb5Q91XX5 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhgb5Q91XX5 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhgb5Q91XX5 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhgb5Q91XX5 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhgb5Q91XX5 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.75■□□□□ 0.59
Pcdhgb5Q91XX5 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhgb5Q91XX5 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhgb5Q91XX5 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhgb5Q91XX5 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhgb5Q91XX5 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC18.75■□□□□ 0.59
Pcdhgb5Q91XX5 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC18.75■□□□□ 0.59
Pcdhgb5Q91XX5 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.75■□□□□ 0.59
Pcdhgb5Q91XX5 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhgb5Q91XX5 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhgb5Q91XX5 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhgb5Q91XX5 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhgb5Q91XX5 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhgb5Q91XX5 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC18.74■□□□□ 0.59
Pcdhgb5Q91XX5 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhgb5Q91XX5 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhgb5Q91XX5 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhgb5Q91XX5 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhgb5Q91XX5 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhgb5Q91XX5 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhgb5Q91XX5 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhgb5Q91XX5 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhgb5Q91XX5 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhgb5Q91XX5 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC18.74■□□□□ 0.59
Pcdhgb5Q91XX5 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhgb5Q91XX5 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhgb5Q91XX5 Gm10812-201ENSMUST00000099864 546 ntBASIC18.74■□□□□ 0.59
Pcdhgb5Q91XX5 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Pcdhgb5Q91XX5 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhgb5Q91XX5 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Pcdhgb5Q91XX5 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Pcdhgb5Q91XX5 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhgb5Q91XX5 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhgb5Q91XX5 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhgb5Q91XX5 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhgb5Q91XX5 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhgb5Q91XX5 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
Pcdhgb5Q91XX5 Gm44878-201ENSMUST00000205812 1295 ntBASIC18.73■□□□□ 0.59
Pcdhgb5Q91XX5 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhgb5Q91XX5 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC18.73■□□□□ 0.59
Pcdhgb5Q91XX5 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhgb5Q91XX5 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhgb5Q91XX5 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhgb5Q91XX5 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.72■□□□□ 0.59
Pcdhgb5Q91XX5 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC18.72■□□□□ 0.59
Pcdhgb5Q91XX5 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhgb5Q91XX5 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhgb5Q91XX5 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhgb5Q91XX5 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Pcdhgb5Q91XX5 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC18.72■□□□□ 0.59
Pcdhgb5Q91XX5 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC18.72■□□□□ 0.59
Pcdhgb5Q91XX5 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhgb5Q91XX5 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhgb5Q91XX5 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
Pcdhgb5Q91XX5 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhgb5Q91XX5 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhgb5Q91XX5 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhgb5Q91XX5 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Pcdhgb5Q91XX5 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhgb5Q91XX5 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhgb5Q91XX5 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC18.71■□□□□ 0.59
Pcdhgb5Q91XX5 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhgb5Q91XX5 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhgb5Q91XX5 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC18.71■□□□□ 0.59
Pcdhgb5Q91XX5 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhgb5Q91XX5 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhgb5Q91XX5 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhgb5Q91XX5 Gm20100-201ENSMUST00000209418 2272 ntBASIC18.71■□□□□ 0.59
Pcdhgb5Q91XX5 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
Pcdhgb5Q91XX5 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.71■□□□□ 0.59
Pcdhgb5Q91XX5 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Pcdhgb5Q91XX5 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Pcdhgb5Q91XX5 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Pcdhgb5Q91XX5 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhgb5Q91XX5 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhgb5Q91XX5 Gm32699-201ENSMUST00000221728 1988 ntBASIC18.7■□□□□ 0.58
Pcdhgb5Q91XX5 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC18.7■□□□□ 0.58
Pcdhgb5Q91XX5 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhgb5Q91XX5 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhgb5Q91XX5 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhgb5Q91XX5 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhgb5Q91XX5 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhgb5Q91XX5 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhgb5Q91XX5 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhgb5Q91XX5 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhgb5Q91XX5 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Pcdhgb5Q91XX5 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhgb5Q91XX5 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Pcdhgb5Q91XX5 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhgb5Q91XX5 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhgb5Q91XX5 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhgb5Q91XX5 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhgb5Q91XX5 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhgb5Q91XX5 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC18.69■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms