Protein–RNA interactions for Protein: Q91XX1

Pcdhgc3, Protocadherin gamma C3, mousemouse

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc3Q91XX1 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhgc3Q91XX1 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhgc3Q91XX1 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC17.82■□□□□ 0.44
Pcdhgc3Q91XX1 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhgc3Q91XX1 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhgc3Q91XX1 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhgc3Q91XX1 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhgc3Q91XX1 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhgc3Q91XX1 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhgc3Q91XX1 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.81■□□□□ 0.44
Pcdhgc3Q91XX1 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhgc3Q91XX1 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhgc3Q91XX1 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhgc3Q91XX1 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhgc3Q91XX1 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhgc3Q91XX1 AC154266.1-201ENSMUST00000223190 503 ntBASIC17.81■□□□□ 0.44
Pcdhgc3Q91XX1 Rps24-207ENSMUST00000224568 714 ntBASIC17.81■□□□□ 0.44
Pcdhgc3Q91XX1 AC093043.1-201ENSMUST00000226700 898 ntBASIC17.81■□□□□ 0.44
Pcdhgc3Q91XX1 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhgc3Q91XX1 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhgc3Q91XX1 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhgc3Q91XX1 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhgc3Q91XX1 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Pcdhgc3Q91XX1 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.81■□□□□ 0.44
Pcdhgc3Q91XX1 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhgc3Q91XX1 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhgc3Q91XX1 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Pcdhgc3Q91XX1 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhgc3Q91XX1 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhgc3Q91XX1 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhgc3Q91XX1 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.8■□□□□ 0.44
Pcdhgc3Q91XX1 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC17.8■□□□□ 0.44
Pcdhgc3Q91XX1 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC17.8■□□□□ 0.44
Pcdhgc3Q91XX1 5830487J09Rik-201ENSMUST00000198600 1256 ntTSL 5 BASIC17.8■□□□□ 0.44
Pcdhgc3Q91XX1 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC17.8■□□□□ 0.44
Pcdhgc3Q91XX1 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC17.8■□□□□ 0.44
Pcdhgc3Q91XX1 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC17.8■□□□□ 0.44
Pcdhgc3Q91XX1 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhgc3Q91XX1 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhgc3Q91XX1 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhgc3Q91XX1 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhgc3Q91XX1 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhgc3Q91XX1 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhgc3Q91XX1 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhgc3Q91XX1 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhgc3Q91XX1 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhgc3Q91XX1 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC17.79■□□□□ 0.44
Pcdhgc3Q91XX1 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhgc3Q91XX1 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhgc3Q91XX1 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhgc3Q91XX1 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhgc3Q91XX1 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhgc3Q91XX1 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhgc3Q91XX1 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhgc3Q91XX1 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Pcdhgc3Q91XX1 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhgc3Q91XX1 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Pcdhgc3Q91XX1 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhgc3Q91XX1 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhgc3Q91XX1 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhgc3Q91XX1 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Pcdhgc3Q91XX1 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhgc3Q91XX1 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhgc3Q91XX1 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhgc3Q91XX1 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhgc3Q91XX1 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhgc3Q91XX1 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Pcdhgc3Q91XX1 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.78■□□□□ 0.44
Pcdhgc3Q91XX1 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhgc3Q91XX1 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhgc3Q91XX1 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC17.78■□□□□ 0.44
Pcdhgc3Q91XX1 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC17.77■□□□□ 0.44
Pcdhgc3Q91XX1 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhgc3Q91XX1 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhgc3Q91XX1 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhgc3Q91XX1 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhgc3Q91XX1 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhgc3Q91XX1 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC17.77■□□□□ 0.44
Pcdhgc3Q91XX1 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhgc3Q91XX1 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Pcdhgc3Q91XX1 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
Pcdhgc3Q91XX1 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
Pcdhgc3Q91XX1 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
Pcdhgc3Q91XX1 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Pcdhgc3Q91XX1 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Pcdhgc3Q91XX1 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.77■□□□□ 0.43
Pcdhgc3Q91XX1 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Pcdhgc3Q91XX1 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhgc3Q91XX1 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhgc3Q91XX1 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Pcdhgc3Q91XX1 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhgc3Q91XX1 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhgc3Q91XX1 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhgc3Q91XX1 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhgc3Q91XX1 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhgc3Q91XX1 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhgc3Q91XX1 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC17.76■□□□□ 0.43
Pcdhgc3Q91XX1 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhgc3Q91XX1 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhgc3Q91XX1 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms