Protein–RNA interactions for Protein: Q91UZ8

Pcdhb11, MCG141285, mousemouse

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb11Q91UZ8 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhb11Q91UZ8 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhb11Q91UZ8 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhb11Q91UZ8 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhb11Q91UZ8 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhb11Q91UZ8 Gm18688-201ENSMUST00000204695 1859 ntBASIC19.35■□□□□ 0.69
Pcdhb11Q91UZ8 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhb11Q91UZ8 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhb11Q91UZ8 Dapk1-207ENSMUST00000226059 5009 ntBASIC19.34■□□□□ 0.69
Pcdhb11Q91UZ8 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhb11Q91UZ8 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhb11Q91UZ8 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC19.34■□□□□ 0.69
Pcdhb11Q91UZ8 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhb11Q91UZ8 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhb11Q91UZ8 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhb11Q91UZ8 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhb11Q91UZ8 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhb11Q91UZ8 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pcdhb11Q91UZ8 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pcdhb11Q91UZ8 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pcdhb11Q91UZ8 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pcdhb11Q91UZ8 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pcdhb11Q91UZ8 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Pcdhb11Q91UZ8 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdhb11Q91UZ8 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdhb11Q91UZ8 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdhb11Q91UZ8 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdhb11Q91UZ8 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC19.33■□□□□ 0.68
Pcdhb11Q91UZ8 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdhb11Q91UZ8 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Pcdhb11Q91UZ8 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhb11Q91UZ8 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhb11Q91UZ8 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhb11Q91UZ8 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhb11Q91UZ8 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhb11Q91UZ8 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhb11Q91UZ8 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhb11Q91UZ8 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhb11Q91UZ8 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhb11Q91UZ8 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhb11Q91UZ8 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhb11Q91UZ8 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhb11Q91UZ8 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC19.32■□□□□ 0.68
Pcdhb11Q91UZ8 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhb11Q91UZ8 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhb11Q91UZ8 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhb11Q91UZ8 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhb11Q91UZ8 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhb11Q91UZ8 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Pcdhb11Q91UZ8 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Pcdhb11Q91UZ8 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhb11Q91UZ8 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhb11Q91UZ8 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhb11Q91UZ8 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC19.31■□□□□ 0.68
Pcdhb11Q91UZ8 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhb11Q91UZ8 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC19.31■□□□□ 0.68
Pcdhb11Q91UZ8 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC19.31■□□□□ 0.68
Pcdhb11Q91UZ8 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhb11Q91UZ8 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhb11Q91UZ8 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhb11Q91UZ8 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhb11Q91UZ8 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Pcdhb11Q91UZ8 AC126028.2-201ENSMUST00000228100 1833 ntBASIC19.3■□□□□ 0.68
Pcdhb11Q91UZ8 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhb11Q91UZ8 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhb11Q91UZ8 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhb11Q91UZ8 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhb11Q91UZ8 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhb11Q91UZ8 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhb11Q91UZ8 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhb11Q91UZ8 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC19.3■□□□□ 0.68
Pcdhb11Q91UZ8 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhb11Q91UZ8 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhb11Q91UZ8 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhb11Q91UZ8 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Pcdhb11Q91UZ8 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhb11Q91UZ8 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhb11Q91UZ8 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhb11Q91UZ8 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhb11Q91UZ8 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhb11Q91UZ8 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhb11Q91UZ8 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC19.29■□□□□ 0.68
Pcdhb11Q91UZ8 Gm26571-201ENSMUST00000181399 666 ntBASIC19.29■□□□□ 0.68
Pcdhb11Q91UZ8 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC19.29■□□□□ 0.68
Pcdhb11Q91UZ8 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhb11Q91UZ8 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC19.29■□□□□ 0.68
Pcdhb11Q91UZ8 Gm18671-201ENSMUST00000214826 683 ntBASIC19.29■□□□□ 0.68
Pcdhb11Q91UZ8 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhb11Q91UZ8 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhb11Q91UZ8 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhb11Q91UZ8 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Pcdhb11Q91UZ8 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhb11Q91UZ8 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Pcdhb11Q91UZ8 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhb11Q91UZ8 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhb11Q91UZ8 Gm10849-201ENSMUST00000100397 618 ntBASIC19.28■□□□□ 0.68
Pcdhb11Q91UZ8 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
Pcdhb11Q91UZ8 Gm13534-201ENSMUST00000121169 513 ntBASIC19.28■□□□□ 0.68
Pcdhb11Q91UZ8 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Pcdhb11Q91UZ8 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 129.6 ms